Populus alba (white poplar): 118057363
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Entry
118057363 CDS
T07314
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
palz
Populus alba (white poplar)
Pathway
palz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118057363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
palz03009
]
118057363
Ribosome biogenesis [BR:
palz03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
118057363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Utp12
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WDR90_beta-prop_4th
EIF3I
ANAPC4_WD40
WD40_Gbeta
Beta-prop_ACSF4
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_IFT122_1st
PQQ_2
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
118057363
NCBI-ProteinID:
XP_034925812
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Position
10:complement(495628..502212)
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AA seq
616 aa
AA seq
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MVSLNIRDLLTAFSPSLDYLAISSGDGRIKIWDTLKGQVQTEFADITSSEGDXFYAKPER
GHLSVDYKCMKWLSLDKKKKRKLGSSLLVLGTGSGDVLALDVSAGQLKWGVSDCHPGGVS
AVSFSTRDSCIYTSGADGMICKTDPQTGNTLGKFRASTKAISCMSVSSDGKILATAAAQL
KIFNCSDHKKMQKFSGHPGAVRSMVFTDDGKYILSSAVGERYVALWRIDGGKRQSASCVL
AMEHPAVFIDCKCFENEGVDDAGLYVLAISETGVCYTWCGKNVEELRNSKPTKVLLSYEE
FPKNHKGALPTVLAAKLQGTAKSTAANVFIAYGLLVKPSFQKILMHPGTDIKLNSSQDGV
LLPLSQSLSNSKKVRDLQNRVTALDRANVEDALLPLPKVYDLHEKKMRNMNIVDHDEVME
ESAESKDVMVEVDAVTTGMEKQLRLLNILGSKDDGILSPTLDSATLKGINLEDNIPLKKM
RATVLSMEPSNAYKLLEVLVAKWQSRSNSGKCVLPWIYCILVNHGQYIVAQEKPESQMLN
SLLKITKSRAVAVQPLLQLAGRLQLVTAQIDKVALSKNPISLHNDQMDDNEDDDDVDEHL
YGEEDDESQLSSDDDS
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccttgaatatcagagacctcttgacagcatttagtccttcattggactactta
gcaatcagctcgggagatggtcgaataaagatctgggatacactaaagggccaggtgcaa
actgagtttgcagacataacatcaagtgaaggagatnntttttatgctaaacctgaacga
ggacacctttcggttgattataaatgcatgaagtggttgtctttggataagaagaagaaa
aggaagctaggaagttcattgttagtgttaggaacgggcagtggtgatgttttggcactt
gatgtgtctgctggtcagttgaagtggggtgttagcgattgccatcctgggggtgtcagt
gctgtttcattttctacacgtgattcgtgcatttacacttcaggtgctgatggaatgatt
tgcaaaactgatccacaaacaggaaatactctggggaagtttagagcttctacaaaggcg
atatcctgcatgtctgtttcatcagatgggaagatattagcaacagcagccgcacaattg
aagattttcaattgctctgaccacaaaaagatgcagaagttctctggtcatcctggagct
gttcgctccatggtctttactgatgatggaaaatacattctttcttctgctgttggtgaa
agatatgttgcactgtggagaatagatggtggcaaacggcaatcagcaagctgtgttctc
gcaatggagcaccctgctgtattcattgattgcaagtgctttgaaaatgagggagttgat
gatgcaggcctgtatgttttggccatttcagaaactggtgtttgttacacgtggtgtgga
aaaaatgttgaggaattacgcaattccaaacccacaaaagtcttactatcttacgaagaa
tttcccaaaaatcacaagggtgcattaccaacagtactcgctgcaaaattacaaggcact
gccaaatctacagctgcaaatgtgtttattgcctatggtttgcttgtaaagccttcattt
cagaaaatattaatgcatcctgggacagacattaagttaaatagctctcaggatggagtt
ctgctaccactgagtcagtctctcagcaactctaagaaagtcagagacttacaaaatcga
gttactgcattagaccgtgccaatgtggaagatgccttgcttcctctcccaaaagtttat
gatcttcatgagaagaagatgagaaatatgaatattgttgaccatgatgaggttatggaa
gaatctgctgagagcaaagatgtcatggtagaggttgatgctgtaacaactggcatggag
aagcagttgagattattgaacatacttggtagtaaagatgatggtatattgagccccaca
cttgattctgcaacacttaagggtattaaccttgaagacaatatcccgctaaagaagatg
agggcaacagtcttgtctatggaacctagcaatgcatacaagttactggaagtcttggtg
gctaagtggcaatctaggtcaaatagtggaaagtgtgttttaccatggatatactgtata
ttggtcaatcatggtcaatatattgtggctcaagaaaaaccggagtcccagatgcttaat
tccttattaaagatcaccaaatcaagggctgtggctgttcaacctttgttgcaattagca
ggtcgtttgcagcttgtaacagcacagattgacaaggttgcactgagcaaaaaccctatc
tcattgcataatgaccaaatggatgataacgaggatgatgatgatgtcgacgaacatctt
tatggggaagaagatgacgaatcccagttaagtagtgatgatgacagttag
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