Populus alba (white poplar): 118057460
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Entry
118057460 CDS
T07314
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
palz
Populus alba (white poplar)
Pathway
palz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118057460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118057460
03009 Ribosome biogenesis [BR:
palz03009
]
118057460
04131 Membrane trafficking [BR:
palz04131
]
118057460
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
palz04147
]
118057460
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
118057460
Ribosome biogenesis [BR:
palz03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
118057460
Membrane trafficking [BR:
palz04131
]
SNARE
SNARE associated proteins
Others
118057460
Autophagy
Aggrephagy
Other aggrephagy associated proteins
118057460
Exosome [BR:
palz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118057460
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_5
CDC48_2
AAA_33
AAA_14
AAA_22
TIP49
NPHP3_N
RNA_helicase
nSTAND3
Mg_chelatase
AAA_28
AAA_17
nSTAND_NTPase5
ATPase_2
Parvo_NS1
Vps4_C
AAA_18
ABC_tran
Viral_helicase1
NB-ARC
AAA_lid_PRS2_C
AAA_7
NACHT
TsaE
IstB_IS21
ResIII
DUF815
Zeta_toxin
AAA_24
Zot
Motif
Other DBs
NCBI-GeneID:
118057460
NCBI-ProteinID:
XP_034925932
LinkDB
All DBs
Position
15:14788404..14792960
Genome browser
AA seq
813 aa
AA seq
DB search
MEDPSSSQPSSSTDPKSGKKDFSTAILERKKSPNRLVVDEAINDDNSVVAMHPATMEKLQ
FFRGDTVLIKGKKRRDTVCIVLAEEQCEEPKIRMNKVVRANLRVRLGDVVSVHQCPDVKY
GKRVHILPIDDTIEGVTGNLFDAYLKPYFLESYRPVRKDDLFLVRGGMRSVEFKVIETDP
GEYCVVAPDTEIFCEGEPIKREDEERLNEVGYDDVGGVRKQMAQIRELVELPLRHPQLFK
SIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFE
EAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPN
SIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEEVDLEKVAKDTHGYVGADL
AALCTEAALQCIREKMDVIDLEDDTIDAEVLNSMAVTNEHFQTALGISNPSALRETVVEV
PNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAI
ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVG
DAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEA
SRLQIFKACLRKSPVSKDVDLTALAKYTNGFSGADITEICQRACKYAIRENIEKDIEKEK
RKQENPEAMEEDDVDEVPEIKAAHFEESMKYARRSVSDADIRKYQSFAQTLQQSRGFGTE
FRFPDRPENAAAGGATDPFASATTAADEDDLYS
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggaggatccaagctctagccagccctcctcttccactgacccgaaaagtggtaagaaa
gatttttcgacagcgattttagagcgaaagaagtctcccaatcgtcttgttgttgacgag
gcgatcaatgatgataactctgtggttgctatgcatcctgctacaatggagaagcttcag
ttttttcgtggtgacactgtgctaattaagggaaagaagcgtagagacactgtttgcatt
gttcttgctgaggaacaatgtgaggaaccaaaaatcagaatgaacaaagttgtcagggct
aatcttagagtgcgtcttggtgatgttgtttctgtccatcaatgtcctgatgtgaagtat
gggaagcgggttcatatccttcctattgatgacactattgagggtgttactggcaatctt
tttgatgcatatttgaagccatatttcttggaatcttaccgccctgtcaggaaagatgac
cttttccttgtcaggggtggaatgcgcagtgttgagttcaaagtaattgagacagaccct
ggtgaatactgtgttgtggcaccagacactgagatcttttgtgagggggagcccatcaaa
cgcgaggatgaagagagattgaatgaagtgggctatgatgatgttggtggtgttaggaaa
caaatggctcagattcgtgagctagttgaacttcctcttagacacccacagcttttcaaa
tcaattggtgtgaaaccgccaaaaggtatattgctgtatggaccacctgggtctggtaaa
actctgattgcaagagctgttgctaatgagacaggggcattcttctttttgattaatggt
cctgagataatgtcaaagctggctggtgagagtgaaagcaacttgaggaaggcgtttgag
gaagctgaaaagaatgcaccatccataatttttatcgatgagatagattctattgctcct
aagagggaaaagactcacggtgaagtggagaggcgtatagtttcacaacttttgacttta
atggatggccttaagtcacgggcacatgtgattgttatgggggctaccaataggcccaat
agcattgacccagctttgaggagatttgggagatttgatcgagagattgacattggtgtg
ccagatgaagttggacggttggaggtcctcagaattcatactaaaaatatgaaacttgct
gaagaggttgatcttgaaaaagttgcaaaggatacccatggttatgttggtgcagatctt
gcagctctttgtactgaggctgctcttcagtgtattagggagaaaatggatgttattgat
ttggaggatgacacaattgatgccgaggtgttaaactcaatggctgtgactaatgagcac
ttccaaactgctttgggaatttcaaatccatcagccttgcgtgaaacagttgtggaggtt
cctaatgtctcatgggaggatattggtggattggagaatgttaaaagagagcttcaagag
actgtccaatatccagtggagcatcctgagaagtttgagaaatttggcatgtcaccttct
aaaggtgttctcttttatggacctcctggctgtggtaaaaccctacttgcaaaggcaatt
gctaatgaatgccaggccaatttcattagtgtcaagggtcctgagcttctaaccatgtgg
tttggagaaagtgaagcaaatgtgcgggagatattcgacaaagcacggcagtcagcccct
tgtgtacttttctttgacgaacttgattccattgctactcagcgtggcagctctgtagga
gatgctgggggtgctgctgatagagtcttgaatcaacttctgacggaaatggatggcatg
acagcaaagaaaacagtttttatcattggagcaacaaacaggccagatattatagaccca
gcattgctcaggcctggccgtctggatcagttgatttatatacctcttcctgatgaggct
tcccgtcttcagatatttaaagcatgtttgcggaagtcacctgtttctaaggatgttgac
ctgacagctcttgcaaaatatactaatggttttagtggtgctgatatcactgaaatttgt
caacgtgcctgcaaatatgccattagagaaaatattgagaaggatattgagaaggagaaa
aggaagcaagagaatcctgaagcaatggaagaagatgatgttgatgaggtcccagaaata
aaggcagcacattttgaggagtcaatgaaatatgcacgacgaagcgtcagtgatgcagac
atcaggaagtaccaatcctttgctcagaccttacagcaatctcgtggatttggtaccgag
ttccggtttccagaccgtcctgagaatgctgcagcaggaggagctacagatccttttgct
tcagccaccactgctgccgatgaggatgatctatacagctga
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