Populus alba (white poplar): 118057538
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Entry
118057538 CDS
T07314
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
palz
Populus alba (white poplar)
Pathway
palz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118057538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palz03021
]
118057538
03036 Chromosome and associated proteins [BR:
palz03036
]
118057538
Transcription machinery [BR:
palz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118057538
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118057538
PBAF complex
118057538
GBAF(ncBAF) complex
118057538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
118057538
NCBI-ProteinID:
XP_034926032
LinkDB
All DBs
Position
15:complement(16149041..16152613)
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AA seq
575 aa
AA seq
DB search
MSKIMEPTTPSDPNLNPIRPNEPELDLYTIPSYSSWFSWHDIHETERAALREFFDGSSIT
RTPKIYKEYRDFIINKYREDPSRRLTFTEIRKSLVGDVSLLNKVFLFLNNWGLINFSCEK
NEEIGLGSGNVDVRVEDGAPNGVRIVEMPDKLKPISVGSVQSSAEGSGGGGGGGSGLKLP
PLASYSDVFGELVGKKKEVVCGNCGGSCDSGQYEYSKGDYLICQKCFNDGTYGENKSKDD
FKLKDSAENNGSNAAAWTEEETLRLLESVSRHGNDWDLVAQNVKTKTKLDCISKLIELPF
GDLILSSTYGKGNSSGQIGSTNNSKQFPAAPSEHQDDTKHEDQLHEQMNANEEKGDVMDD
GPLLKRRRVTSVSNAGGSLMKQAALISTMVGPDITAAAAEAAVAALCDETACPREIFDGE
EDFPSNGFSSPSFHSKSKRVDEVDASEVKQTPTQSGTEEASAWQNDIPLSLRLRAAVATT
LGAAAAHAKLLADQEDREVENLMATIVETQLKKLHHKIKHFDDLELIMEREYAELDELTE
SLTEERIDVLQRAIRAGISKSRDHAPIKFHMSNVV
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaattatggagccaacaacaccctccgacccgaatctaaacccgatccgacca
aacgaaccagagctcgacctctacaccatccccagctattcaagttggttttcatggcac
gatattcacgagacagagagagccgctttaagagaattcttcgatgggagctcaataacg
agaactccaaaaatctacaaagaatacagagactttataatcaacaagtaccgtgaagat
ccttctagaaggttaacattcacggagattcgaaagtcactggttggtgacgttagtttg
ttgaataaagtttttctgtttttgaataattggggattgattaattttagttgtgaaaag
aatgaggaaattggtttgggttcgggtaatgttgatgttcgggttgaagatggggctccg
aacggagttcggattgtggagatgcctgataagttgaaaccaatttcggtggggtcggtg
caaagtagcgcagagggtagtggtggtggtggtggtggtgggagtgggttgaagttgccg
cctttggcgtcctattcggatgtttttggcgagttagttgggaagaagaaagaggttgtt
tgtggaaattgcggtggaagttgtgattccggccaatacgagtatagtaagggtgattac
ttaatctgtcaaaaatgctttaatgatggaacttatggcgagaacaagtctaaagatgat
ttcaagcttaaggatagtgctgaaaacaatggtagcaatgcagctgcgtggactgaggag
gagactttgcgtcttttagaatctgtttcgaggcatgggaatgactgggacctggttgct
caaaatgttaaaaccaagactaaacttgattgtatttctaagctcattgagctgccattt
ggggatcttatattgagttctacatatggaaagggcaattctagtggacagattggaagc
acaaacaactcaaaacaatttcctgcagctccatctgagcatcaagatgatacaaaacat
gaagatcaattgcatgagcagatgaatgcaaatgaggagaagggagatgtcatggatgat
ggtccccttttgaaaagaagacgcgtcacttctgtttcaaatgctggtggctctctgatg
aaacaggcagctctcatctcaaccatggttggcccagatatcacagctgctgcagctgag
gctgctgttgcagcactttgtgatgaaactgcatgtccaagagagatatttgatggtgag
gaggattttccatctaatgggttttcttctccctccttccattccaagtctaagagagtt
gacgaggttgatgcctcagaggtgaagcaaacacccactcagtcaggaaccgaggaggca
tctgcatggcagaatgacatacctctatctttgcgtcttagagctgctgttgcaacaact
cttggggcagctgctgctcatgctaaattactggcagatcaggaagaccgagaagttgag
aatttaatggcaaccatagttgagacacagttgaagaaactgcaccacaaaatcaagcac
tttgatgatctggagctgataatggagagggaatacgctgaattagatgaactaacagag
tccttgaccgaggagcggattgatgtcttgcaaagggcaattcgtgcaggcatatctaaa
tcaagggatcatgcgcccataaaatttcacatgtcaaatgtagtttga
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