Populus alba (white poplar): 118057566
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Entry
118057566 CDS
T07314
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
palz
Populus alba (white poplar)
Pathway
palz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118057566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palz03021
]
118057566
03036 Chromosome and associated proteins [BR:
palz03036
]
118057566
Transcription machinery [BR:
palz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118057566
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118057566
PBAF complex
118057566
GBAF(ncBAF) complex
118057566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
NOP5NT
Motif
Other DBs
NCBI-GeneID:
118057566
NCBI-ProteinID:
XP_034926069
LinkDB
All DBs
Position
15:15819238..15821831
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AA seq
537 aa
AA seq
DB search
MNNNSNNPVRSIGLPPSLANPGAMAQSTHVNHQPPQLLSQSQPQTQGGPAFPGHFQLSEP
QARVPGHTQFAQAAHTQFQSHIQSTNHAVAQLQNANSANVGVQSPPVPTPSSSSAKKTSY
KPPSRPSSGSSNANASLFKTMELAPAVRRKKRKLHEKEIPDKVVPVLPESALYTQLLEFE
ARVDTAMARKKMDIQESLKNPSRARKMLRVYVFNTFENQVQGSNERKSSEPPSWSLKIIG
RILEDGKDPVLTGMTQKPYPKFSSYFKKITIYLDQSLYLDNHVILWESTRSPILHEGFEV
KRKGNKEFTARIRLEMNYVPEKFKLSPALSEILGIEVETRPRILVAIWHYVKSRKLQNPN
DPSFFTCDPPLQKLFGEEKMKFSQVLQRISLHLTPPQPILLEHSIKLSGKCPAGTACYDF
IVDVPLPLQKDLAAFLTSTERNKEIDACDELICNSIKKIHEHRQRQAFFLGFSQSPAELI
NALIASQSNDLKLVAGDASRNAEKEQRSGFYNQPWVEDAVIRYLNRKSTVNDAPGSS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgaataataatagtaacaatcctgtaagaagtattgggttgcccccctcgttagcgaat
cctggtgcaatggcacaatctacgcacgtgaaccaccaaccaccgcagttgctctcacag
tcacaacctcaaacacaaggcgggcctgcatttcctggccactttcagctgtctgaacca
caagctcgggtgccaggacacactcagtttgcacaggcagctcatactcagtttcaatct
catatacaatcaaccaaccatgctgttgctcagttgcaaaatgctaattctgctaatgtt
ggtgtgcaatcacctcctgtgcccacaccaagcagttctagtgctaaaaagactagctat
aaaccaccttcgaggccttcatctggttcatcgaatgccaacgcttcgctgttcaagacc
atggagttggctccagctgttcgtaggaagaaaaggaagcttcatgagaaggagatacct
gataaggtggtacctgttttgccagagtctgcgctttatacccagctgcttgaatttgag
gctagagtggatactgctatggcaagaaagaaaatggatattcaagagtcacttaaaaac
ccatcccgtgctcggaaaatgcttcgggtatatgtatttaacacttttgaaaatcaggtg
caagggtctaatgagaggaagagttctgagcctccttcttggtcattaaaaattattggg
aggatattggaagatgggaaggaccctgtgctgactggaatgacccagaaaccatatcca
aaattctcatcttacttcaagaaaattacaatatacttggaccagagcctctatctagat
aaccatgtaattctatgggagagcacacggtcacctattcttcacgagggctttgaggtg
aagagaaaaggaaataaggaatttactgcaagaattagactagaaatgaattatgtgcct
gagaaattcaagctttcacctgctctatcagaaatccttggaatcgaggtagagactcgc
cctagaattttggttgcgatatggcattatgtgaagtctaggaagttgcagaacccaaat
gatccctcctttttcacatgtgacccccctctacagaaactattcggggaagagaagatg
aaattttctcaggtactacagaggataagtctgcatttaactcctccacagcctattctt
ttggaacattcgatcaagctctcagggaagtgcccagctggaactgcttgctatgatttc
atagttgatgttcctttgccattgcaaaaggaccttgctgcattcttgaccagcacagag
aggaacaaagaaattgatgcttgtgatgaattaatatgcaactctataaagaaaatacat
gagcatcgtcagaggcaggctttctttcttggtttcagccagtctccagcagagcttatt
aatgctttaattgcttctcagagcaatgatctgaagcttgttgctggagatgcaagccgc
aatgcagagaaagagcagcgatctggtttctataatcagccgtgggttgaagatgctgtt
attcgttacctaaatcgcaagtctactgtaaatgatgctcctggaagctcttga
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