Populus alba (white poplar): 118057638
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Entry
118057638 CDS
T07314
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118057638
Enzymes [BR:
palz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
118057638
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
118057638
NCBI-ProteinID:
XP_034926168
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Position
15:complement(15313396..15315440)
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AA seq
424 aa
AA seq
DB search
MSLTPFPLFSQFLSSRRRQQTMANPSLCLLFLFSLLTPALISSSAVQDPELVVQEVHRAI
NASRRKLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAIGGRDGKIYVVTDS
GNDDPVNPKPGTLRHAVIQDEPLWIIFARDMTIQLKEELIMNSFKTIDGRGASVHIAGGP
CITIQYVTNIIIHGLHIHDCKQGGNAMVRDSPQHFGWRTVSDGDGVSIFGGTHVWVDHNS
LSNCNDGLVDAIHGSSAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLV
QRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFVAPDIRFSKEVTKHEDAPE
SEWKHWNWRSEGDLLMNGAFFTASGAGASSSYARASSLGARPSSLVGTITVGAGALGCRK
GARC
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcacacccttccctctcttctcacagtttctctcctctcgaagaagacaacaa
acaatggcgaacccttctctctgtctcctcttcctcttctctctcctaaccccagccctc
atctcctcttccgcagttcaggacccggaactcgtagtacaagaagtgcatagggccatc
aatgcttctaggaggaagctgggctatctctcttgcggaactggcaaccccattgatgac
tgctggaggtgtgatcccaattgggagaagaaccgtcagaggctagcggattgtgcaatt
gggttcggtaagaatgccattggtggaagagatggcaagatttatgtggtcacagactct
ggtaatgatgatcccgtgaaccctaagccagggactctcaggcatgctgtgatccaggac
gagccattgtggatcattttcgctcgagacatgacaattcaactcaaggaagagttgatc
atgaactcgttcaagacgattgatggtagaggtgctagtgtccatattgccggcggtccg
tgcatcaccatacagtatgtgaccaacattatcatacatggactacacatacacgattgc
aagcaaggagggaatgctatggtgagagactccccacagcactttggctggaggactgta
tccgatggtgacggtgtgtccatcttcggcggtactcacgtatgggtggaccataattcg
ttgtccaattgtaacgacggacttgtcgacgccattcatgggtcctcggccatcaccatt
tcgaacaattacatgacccaccatgataaagtcatgcttctggggcacagcgattcctac
actcaggacaagaacatgcaagtcaccatagcctttaatcactttggagaagggcttgtc
cagagaatgccaagatgcagacacgggtatttccatgtggtcaacaatgactacacccat
tgggaaatgtacgccattggaggtagtgctaacccaaccatcaacagccaaggcaataga
tttgttgcacccgacatcaggttcagtaaagaggtaacgaaacatgaagacgcaccagag
agtgaatggaagcactggaattggaggtccgaaggagacctgctaatgaacggtgcgttt
ttcacagcatccggtgcaggtgcttcttcaagctacgccagggcatcaagcttgggtgca
agaccatcttcgcttgtcggtacaataacagtgggagcgggtgcacttggttgcaggaaa
ggggctcgttgctag
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