KEGG   Populus alba (white poplar): 118057875
Entry
118057875         CDS       T07314                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
palz  Populus alba (white poplar)
Pathway
palz03030  DNA replication
palz03410  Base excision repair
palz03420  Nucleotide excision repair
palz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    118057875
   03410 Base excision repair
    118057875
   03420 Nucleotide excision repair
    118057875
   03430 Mismatch repair
    118057875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:palz03032]
    118057875
   03036 Chromosome and associated proteins [BR:palz03036]
    118057875
   03400 DNA repair and recombination proteins [BR:palz03400]
    118057875
DNA replication proteins [BR:palz03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    118057875
  DNA Replication Termination Factors
   ELG1-RFC complex
    118057875
Chromosome and associated proteins [BR:palz03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    118057875
DNA repair and recombination proteins [BR:palz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     118057875
  Check point factors
   HRAD17(Rad24)-RFC complex
    118057875
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_22 AAA_16 AAA_11 ATPase_2 AAA_assoc_2 AAA_5 AAA_14 DUF815 AAA_7 RuvB_N AAA_30 AAA_19 AAA_24 AAA_3 bpMoxR ResIII nSTAND3 DNAX_ATPase_lid TniB AAA_28 AAA_25 SLFN-g3_helicase TIP49 UBA_Rad5 Mg_chelatase AAA_2 ABC_tran MCM
Other DBs
NCBI-GeneID: 118057875
NCBI-ProteinID: XP_034926527
LinkDB
Position
14:complement(13527171..13530777)
AA seq 363 aa
MAEAIALMDIDEEENQNHLSKPNKGKNVVVPATPPGGKATPWVEKYRPQSLADVAAHRDI
IDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVV
RKQIQDFASTQSFSFGAKISVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV
NKIIPALQSRCTRFRFAPLDPMHVGERLKHVIEAEGLDVPESGLEALKCLSNGDMRKALN
ILQSTHMASQQITEETVYLCTGNPLPQDVQQITHWLLNESFAESYKRISEIKTRKGLALV
DIVREVTMFVFKIKMQSDIRVPLINDLADIEYRLSFGCNDKLQLGSLIASFTRARSALVA
AAN
NT seq 1092 nt   +upstreamnt  +downstreamnt
atggcggaggcgatcgcactcatggacattgacgaagaggagaaccagaaccacttatcg
aaaccaaacaaaggcaaaaacgtcgtcgtacccgccacaccacccggcggtaaagctact
ccctgggttgagaagtaccgtcctcaatcactcgccgatgtcgccgctcaccgtgacatt
atcgataccattgataggctgaccagtgaaaacagattgccgcatctcttgttatatggc
cctcctggcacgggcaaaacgtcaacaattcttgctgtggcgcgtaaactttacggagcg
cagtaccacaatatgattttggagttgaatgcatcagatgatagaggaatagacgtcgtg
cggaagcaaatacaagatttcgctagcactcagagcttctcttttggcgcaaagatatct
gtaaagttggttttacttgacgaggcagatgcaatgacaaaggatgcacaatttgccttg
cgtagagtgattgagaaatatacgaagaacaccaggtttgcacttatctgcaatcatgtg
aacaagattatcccagcactacagtctcgatgtactcgatttcgatttgctcctctggat
ccaatgcatgttggtgaacgacttaaacatgtcatagaggctgaagggcttgatgtacca
gagagtggcctagaggcgcttaaatgtcttagcaatggtgacatgagaaaggctttgaat
atactgcagtcgactcacatggcttctcaacaaattacagaagaaactgtatacctgtgc
actggaaacccattgccccaagatgtgcagcaaataacccactggcttctgaatgaatct
tttgcagagagctataaacgaatttctgaaattaagacaaggaaaggtttggccttggtt
gatattgtaagagaagtgaccatgtttgttttcaagattaagatgcaatcagatatccga
gtgccattgatcaatgatttggctgatatagaatacaggttgagctttgggtgcaatgat
aagctacaacttggatcacttattgcttcctttaccagggctcgatctgcattggttgca
gccgcaaattag

DBGET integrated database retrieval system