Populus alba (white poplar): 118058140
Help
Entry
118058140 CDS
T07314
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118058140
Enzymes [BR:
palz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
118058140
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
118058140
NCBI-ProteinID:
XP_034926741
LinkDB
All DBs
Position
1:38048256..38050361
Genome browser
AA seq
403 aa
AA seq
DB search
MSRLAILLIFFFSAPAPHFVFSSSIQDPELVVQEVHRSINASRRNLGYLSCGTGNPIDDC
WRCDPNWERNRQRLADCAIGFGKNAIGGRNGRIYVVTDSGNDDAVNPKPGTLRHAVIQDE
PLWIIFKRDMVIQLKQELVMNSFKTIDGRGASVHIAGGPCITIHYATNIIIHGIHIHDCK
QGGNGDIRDSPRHFGWWTQSDGDGVSIFASKHIWVDHCSLSNCHDGLIDAIHGSTAITIS
NNFMTHHDKVMLLGHSDSYTQDKDMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW
EMYAIGGSAAPTINSQGNRFLAPNRRFNKEVTKHEDAPESEWRHWNWRSEGDLLLNGAYF
RQSGAGASSSYARAYSLSARPSSLVGSMTLTSGVLNCRKGSRC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagacttgcaatccttctgattttctttttctctgctccagcaccacattttgtt
ttctcttcatcaattcaggaccctgagctagtggtacaggaggtgcataggagcatcaac
gcttcaaggagaaaccttggctatttatcatgtggaactggcaaccctatagatgattgc
tggaggtgtgaccccaattgggagaggaatcgccagcggctagctgattgtgctattggg
tttggcaagaacgctattgggggtagaaatggtcgaatttatgttgtgaccgactctggt
aacgatgatgcggtgaaccctaagccaggaactcttaggcatgctgtaattcaggacgag
cccttgtggatcatcttcaagagagacatggtaattcagctgaagcaagagctggtcatg
aactctttcaagactattgatgggaggggtgctagcgttcacattgccgggggaccatgc
atcactattcattatgctactaacattatcatacatggcatacacatacatgactgtaag
caaggagggaacggtgatatacgagactctcctcgccactttggttggtggactcagtcg
gacggtgacggggtttccatctttgctagcaagcatatatgggttgaccattgctccttg
tctaactgtcacgatggacttattgatgccattcatggatcgacagccatcactatctcc
aacaacttcatgacccatcatgacaaggtcatgctgttgggccatagcgactcgtataca
caagacaaagacatgcaagtgactattgcctttaatcattttggcgaggggctggtgcaa
agaatgccaaggtgcaggcatgggtactttcatgttgtgaacaatgactacactcactgg
gaaatgtatgccattggtgggagcgcggctccgacaatcaacagtcaaggaaatagattt
cttgcaccaaatagaagatttaacaaggaggtgactaaacatgaggatgcaccggagagt
gagtggaggcactggaactggaggtcagaaggagatttattgttgaatggtgcctacttc
cggcaatcaggcgccggtgcatcttcaagctatgcaagggcttacagcctgagtgcaaga
ccatcttctcttgtgggttcaatgaccctgacttccggtgtacttaactgcaggaagggc
tctcgatgctga
DBGET
integrated database retrieval system
