Populus alba (white poplar): 118058227
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Entry
118058227 CDS
T07314
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG5 isoform X1
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118058227
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118058227
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118058227
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Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
TerY_C
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
118058227
NCBI-ProteinID:
XP_034926826
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Position
8:complement(12896352..12901349)
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AA seq
472 aa
AA seq
DB search
MGGKSSKGSRRRDYSSYGSANSSSSWNRYGYPPASSYPSPQHNPYWAQQHHHAPAPNPSY
PYESQVPPQQSHKRLDRKFSRIADNYQTLDQVTAALAQAGLESSNLIVGIDFTKSNEWTG
ARSFNRRSLHDIGNGQNPYEQAISIIGRTLSAFDEDNLIPCFGFGDASTHDQDVFSFFPE
ERFCNGFEEVLTRYKEIVPNLRLAGPTSFAPVIEMAITIVEQGGGQYHVLLIIADGQVTR
SVDTHHGQLSPQERRTIDAIVKASEYPLSIILVGVGDGPWEMMREFDDNIPARAFDNFQF
VNFTEIMSKNVSQSRKEAEFALASLMEIPSQYKATIELGLLGSHHTGNAPERVPLPPPLY
GQTSSSKSKASRSSSFQQRVPSYSAYDTPVSGYETTAERASSSYDTPVSGYETTERASSS
SSVYDNQVCPICLTNPKNMAFGCGHQTCCDCGEDLQVCPICRGPIQARIRLY
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtaaaagctcaaaagggtcaagacggagagattattcttcttatggttcagcc
aattcttcatcttcatggaatcgatatggatatcctccagcatcatcatatccatctcct
caacataatccctattgggcacaacaacatcaccatgcacctgctcctaatccatcttat
ccttatgaatcacaagtgcccccccaacaatcacacaagagattggacaggaaattctcg
agaatagctgataattaccagactttggatcaggtgactgctgctcttgctcaagctggt
ttagagtcttctaatctcattgttggaattgacttcacaaaaagcaatgagtggacaggt
gcaagatcatttaatcgaagaagcttacatgatattggaaatggtcaaaatccgtatgaa
caagcaatatcaattattggcaggactttgtctgcattcgatgaggataacttaattcca
tgttttggatttggagatgcatctacacatgatcaagatgtctttagtttctttcctgaa
gagagattctgtaatggatttgaggaagtgctgacacgatacaaagaaattgttcccaac
cttcggctcgctggtccgacatcttttgcacctgttattgaaatggccattactattgtt
gagcaaggtggtgggcaataccatgttttgctgataattgctgatggacaggtgactaga
agtgttgacacacatcatggccagctcagtccacaagagagaaggacaatcgatgcaatt
gtaaaggcaagtgaataccctctatcaatcattttagttggagtcggtgatggaccttgg
gagatgatgagggagtttgatgacaacatccctgctcgagcctttgataatttccagttt
gtgaattttacagaaataatgtccaaaaatgtgagtcagtccagaaaagaggcagaattt
gctcttgcatcattgatggaaataccttctcaatacaaagcaactattgagcttggctta
ttgggcagtcaccacacagggaatgcaccagagagggttcctttgcccccaccactttac
ggtcaaacttcttcaagcaaatcgaaagcttcccgttcaagcagcttccagcagcgtgta
ccttcttactctgcatatgatacaccagttagtggatatgaaacaacagcagagagggct
tcatcttcatatgacacaccagttagtggatatgaaacaacagagagggcttcatcttct
agctctgtgtatgataatcaggtttgccccatttgtctcactaatccaaagaacatggcc
ttcggttgtgggcatcagacttgttgtgattgtggtgaagacctccaagtgtgccccata
tgtcgaggcccaatacaggctagaatcaggctctattag
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