Populus alba (white poplar): 118058355
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Entry
118058355 CDS
T07314
Name
(RefSeq) cullin-4 isoform X1
KO
K10609
cullin 4
Organism
palz
Populus alba (white poplar)
Pathway
palz03420
Nucleotide excision repair
palz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118058355
09124 Replication and repair
03420 Nucleotide excision repair
118058355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118058355
03400 DNA repair and recombination proteins [BR:
palz03400
]
118058355
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
palz04147
]
118058355
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
118058355
DNA repair and recombination proteins [BR:
palz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
118058355
TCR (transcription coupled repair) factors
Cul4-CSA complex
118058355
Exosome [BR:
palz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118058355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
118058355
NCBI-ProteinID:
XP_034926959
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Position
11:complement(9641969..9652497)
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AA seq
811 aa
AA seq
DB search
MSLPTKRSATATTSTAGTSTSNTYPPMKKAKCQAASACSPLDYNKNGLHHSDDVVFDPSS
MSLDDDPKLVDYRPPPAAANLSRKKATLPQPAKKLVIKLVKAKPTLPTNFEEDTWAKLQS
AIKAIFLKQPAPCDLEKLYQAVNDLCLHKMGGNLYLRIEKECEAHISAALQSLVGQSPDL
EVFLKLVATCWKDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKHLSLCPEV
EHKTVTGILRMIERERLGESADRSLLDHLLKMFTSLGIYAESFERPFLECTSEFYAAEGM
KYMQQSDVPDYLKHVESRLNEEQDRCNIYVDASTKKPLIATAETQLLERHISAILDKGFM
MLMDGHRIKDLQTMYSLFLRVNALESLRQALSMYIRRTGQGIVMDEEKDKDMVSSLLEFK
ASLDSIWEESFSKNEGFCITIKDAFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEEL
EGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTN
KLEGMFKDIELSKEINESFRQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELN
VYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKL
SFQDIKDSTGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEEDDSFVFNEGFTAPLYRIK
VNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIK
PADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccccaccaaacgctcagccacagccaccactagcaccgccggtacttccacc
tctaatacttaccctccaatgaagaaggccaagtgccaggccgcctccgcctgctcacct
ctcgactacaacaaaaacggcctccatcactccgatgacgtcgtcttcgatccttcctcc
atgtctctcgacgacgatcccaagctcgtcgactaccgccctcctcccgccgccgctaat
ttgtctcgcaaaaaagctactcttccacagcccgccaagaagctcgtcatcaagctcgtc
aaggctaaaccaactctgcccacaaatttcgaggaggatacatgggctaagctgcagtca
gccattaaggctatattcttgaaacaaccagctccttgtgacttagagaagctttatcag
gctgtcaatgatctgtgcctgcataagatgggggggaatctttatctacgaattgaaaag
gagtgtgaagcacatatatctgcagccttacaatccttagttggtcaaagcccagatttg
gaggttttcttaaaactggttgcaacatgctggaaggatctctgtgaccagatgttgatg
atccgtggcatagccttgtatctggacagaacatatgtgaaacaaaccccaaatgtgcgt
tcattgtgggacatgggcttgcagcttttccgcaagcatctttctttgtgtcctgaagtt
gagcacaaaactgtcactggcatcttacgaatgattgagagggaaagattaggtgaatca
gctgatagatctctccttgaccatctcttgaagatgttcacttcactaggaatttatgca
gaaagttttgaaagacctttccttgagtgcacatctgaattctatgctgctgaaggcatg
aaatacatgcagcaatcagatgttccagattacttgaagcatgtggagtcaagattgaat
gaagaacaagatcgatgtaatatttacgttgatgcaagcactaaaaagccactaatagca
actgcagaaacgcagctacttgaacgccatatatccgcgattcttgataaggggttcatg
atgctgatggatggacatcggattaaggaccttcagacaatgtactcattgtttttaagg
gtcaatgcccttgagtcattaaggcaggcccttagcatgtacatcagaagaactgggcag
ggcattgtcatggatgaagagaaggacaaagatatggtttcctccctgttagaatttaag
gcttctcttgattcaatatgggaagaaagcttctccaagaatgaaggattttgcatcacc
ataaaggatgcatttgagcatctaattaatcttcgccagaaccgtcctgctgagctgatt
gcaaagtttttggacgagaagcttcgtgctgggaataagggtacttccgaggaagagttg
gagggtacacttgataaagttttggttttattcaggtttattcagggtaaggatgtcttt
gaagcattttataagaaggatcttgcaaaaagactgctgttgggaaaaagtgcttctatt
gatgcagagaagtctatgatatctaagctgaaaactgaatgtggtagccagtttacaaac
aagcttgaaggaatgtttaaggatattgaactatcaaaggagataaatgagtccttcaga
caatcatctcaggccaggacaaaacttccatcagggattgaaatgagtgtacatgtttta
accactgggtactggcccacatatccacccatggatgttaggcttcctcatgagctgaat
gtttatcaggatatattcaaagaattctacttaagcaagtatagtggaaggcgcttaatg
tggcaaaactcattgggtcattgtgtattgaaagccgagtttccaaaaggtaaaaaggag
ctggcagtttctctatttcagactgtcgttctgatgctgtttaatgatgcccaaaagctt
agttttcaagatatcaaagactctactggcatagaagacaaggagcttagaagaactttg
cagtctctggcatgtggaaaagttcgggttctgcaaaagctgcccaaagggagggatgtg
gaggaggatgattcctttgtgttcaatgaaggatttacagctccactctatcgaataaag
gtcaatgcaatccagatgaaggaaactgtagaagagaacacaagcaccactgagagagta
tttcaggatcgtcaatatcaggtcgatgctgcgattgttcggataatgaagacaaggaaa
gtgctgagtcacacgcttcttataactgaactattccagcagctgaagtttcctataaag
ccggctgatttgaagaaaaggatagaaagccttatcgacagggaatacctggagcgagac
aagaacaaccctcagatatacaattacttggcctaa
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