Populus alba (white poplar): 118058447
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Entry
118058447 CDS
T07314
Name
(RefSeq) uncharacterized protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
palz
Populus alba (white poplar)
Pathway
palz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118058447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
palz03041
]
118058447
Spliceosome [BR:
palz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
118058447
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Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
118058447
NCBI-ProteinID:
XP_034927038
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Position
6:complement(707549..712044)
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AA seq
557 aa
AA seq
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MKNKREEDDMGSEESGSVLKRQRVDEQSSASGIGNPLVPYNDVDDEDEDFERGKTINGVG
VEGSNTQVVAAENGEDEEEEEDVYGQGDSLERRKSQFEPREDCPYLDTVNRQVLDFDFEK
FCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEII
DPSLDDIRHVLNPRFTRDQVGQIDKNRQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQS
LMRVTPLRNFFLIPENYQHCKSPLVQRFGELMRKIWHARNFKGQVSPHEFLQAVMKVSKK
RFRIGQQSDPVEFMAWLLNTLHANLRTSKKNNSIIYECFQGELEVIKESPNKAITEKKQN
ADDQNSDQRITDGGTKHDIFTETSGMQFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILK
KFDGDTVTEVVRPRVARMKYRVTRLPRYLILHMQRFKKNNFFIEKNPTLVNFPVKNLELK
DFIPLPMPKENERLRSKYDLIANIVHDGKPNEGFYRVFVQRKSEELWYEMQDLHVSETLP
QMVALSEAYVQIYEQQQ
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaagagagaagaagatgatatggggagtgaagaaagtggaagtgttttaaag
aggcagagagtggatgagcagtcctcagcttctggtattggaaacccacttgtcccttac
aatgatgtggatgatgaagacgaggacttcgaaagggggaaaacaattaatggtgttggg
gtggaggggagtaatacacaagttgttgcggcggagaatggtgaggatgaggaggaggaa
gaggatgtgtatggacaaggggatagtttggaaaggaggaagagtcaatttgagcctcgt
gaagattgcccgtatttggatactgttaatcgacaggtgttggattttgatttcgagaaa
ttttgctctgtttctctgtcgaatttgaatgtgtatgcatgtttagtttgtgggaagtat
taccaaggaagagggaagaaatcccatgcttatactcatagtcttgaagcaggacaccat
gtgtacatcaatcttaggacagagaaggtttattgtcttcctgatggatatgagattatt
gacccatcacttgatgacatacgacatgttctcaatccaagatttaccagggatcaagtt
ggacagattgacaaaaacaggcaatggtccagggcacttgatgggtctgattaccttcct
ggaatggtgggtctgaataacatcaaggaaactgattttgtgaatgtaacaattcagtct
ctaatgagagttacacccttaaggaatttcttccttatccctgaaaactatcagcattgt
aagtctcctcttgttcaacgctttggagaactcatgcgtaaaatatggcatgctcggaac
tttaaaggacaggtgagtccacatgaatttctccaggcagttatgaaagttagtaagaaa
cggtttcgaataggacaacagtctgatcctgtggagttcatggcatggcttcttaatacc
ctgcatgcaaatcttagaacttcaaagaaaaataacagtatcatttatgagtgctttcag
ggtgagttggaggttattaaagagagtcctaacaaagctatcactgagaagaaacaaaat
gctgatgatcaaaattctgatcaaagaattactgatggtggaactaaacatgatattttc
acggaaacttctggaatgcaattcttaatgcttggactggatttgccaccacctcctctg
tttaaagatgtaatggagaagaatataatacctcaggttcctctgttcaatatactgaag
aaatttgatggtgatactgtgactgaagttgttcgtcctcgtgttgcccggatgaaatat
cgtgtcaccagattgccacgatatttaatactacatatgcagcgatttaaaaagaacaac
tttttcatcgagaagaatcccaccttggtcaactttcctgtgaagaacttggaattgaaa
gattttattcctttgccaatgcctaaagaaaatgagagattgcgctcgaagtatgatttg
attgcgaacattgtccatgatggaaagcctaatgaggggttctacagggtttttgtgcag
cggaagtcagaagagctatggtatgagatgcaggatctgcatgtttctgaaacccttcct
cagatggttgcgctctctgaggcatatgtgcagatatatgagcagcagcagtag
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