Populus alba (white poplar): 118058454
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Entry
118058454 CDS
T07314
Name
(RefSeq) transcription initiation factor IIF subunit alpha isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
palz
Populus alba (white poplar)
Pathway
palz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118058454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palz03021
]
118058454
Transcription machinery [BR:
palz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
118058454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
Ribosomal_S27e
Motif
Other DBs
NCBI-GeneID:
118058454
NCBI-ProteinID:
XP_034927046
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Position
6:complement(672984..676887)
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AA seq
539 aa
AA seq
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MSFDLQLQPSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRGKCFDCGAIVTRLIREYN
VRASTSSEKNYFIGRFVTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREKFKNKPWLL
EDETGQFQYQGHLEGSQSATYYLLMMSGKEFVAIPAGSWYNFNKVAHYKQLTLEEAEEKM
KNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANGDDDEGNVSDK
GEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAV
AIDPEEREDLAPEVPAPPEIKQDEEDEDEENEEGGLSKSGKELKKLLGKANGLNESDAED
DDDDDDMDDDISPVLAPKQKDAVPKEEPADNSPAKPTPPGSAKGTPSTSKSAKGKRKLNA
DDAKTSNGAPVKKVKTENEVKPTVKEESSPATKGTATPKPMPSSSKTGPTSGPTGPVTEE
EIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNFVVLRDKR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgatcttcagttacagccgtcgtgtagtggctgtggcagcaccacagatttg
tacggaagcaattgcaagcatatgacgttgtgcttgacttgtggcaaaacaatggcggag
aatcgcggcaaatgctttgattgtggcgctatcgttactcgcctgattcgagagtataat
gtgagggcgagtacgagtagcgaaaagaattattttataggaagatttgtgactggattg
ccaggtttttcgaagaaaaaaaatgccgagaataaatggtctttgctgaaagagggaatt
catggtcgccaaattactgatactttgcgggagaagtttaagaataagccatggctattg
gaggatgaaactgggcagtttcagtatcagggtcatcttgaagggtcgcaatcggcgact
tattatctgttgatgatgtctgggaaagagtttgtcgctattcctgctggttcttggtac
aactttaacaaggttgcgcactataagcaacttaccttggaggaagcggaagagaagatg
aagaataggaggaagactgcagatggatatgaaaggtggatgatgaaagctgcacataat
ggagctgctgcatttggtgaggtggagaagccagatgataaggatggtgtttcagctggt
ggaaggggaggtcggaaaaaagcaaacggtgatgatgatgagggcaatgtgtctgacaag
ggagaggaagacgaggaggaagaggcgggaaggaagagtaggcttggactcaataaaggg
ggtggtgatgatgatgaagaaggtccaagaggaggtgatcttgatatggatgatgatgat
attgagaagggcgatgattgggagcacgaagaaattttcactgatgatgatgaagctgtt
gccattgatcctgaggaacgggaagatttagcccctgaagttcctgctcctcctgaaatc
aagcaggatgaagaggacgaggatgaggagaatgaggagggaggactgagcaaatctggg
aaagagttgaagaagctacttgggaaagcaaatggtctgaacgagtcagatgcagaagat
gacgatgacgatgatgatatggatgatgatatttctcctgtactggctccaaagcagaag
gatgctgtgccaaaggaggaacctgctgacaatagtcctgcaaaaccaacgccacctggt
tctgctaagggaaccccatctacctccaagtcagctaaggggaaaagaaaactgaatgct
gatgatgcaaaaacttctaatggtgcacctgtgaagaaggtgaagacagaaaatgaagta
aaacctaccgtgaaagaagaaagctctcctgctactaaaggtactgcaactcctaaacca
atgccatcatcgtcaaaaaccgggccaacatcagggccaactggccctgtcaccgaggaa
gagattagggctgttttgttgcaaaatggacccgtaactacacaggatctggtggctagg
tttaaatcacgactaaggactcctgaggacaagaaggcttttgcggatattctaaggaga
atttctaagattcagaagaccagtggatccaactttgttgtgttgagggacaaacgataa
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