Populus alba (white poplar): 118058615
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Entry
118058615 CDS
T07314
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 14-like
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
palz01002
]
118058615
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118058615
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
palz04147
]
118058615
Enzymes [BR:
palz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118058615
Peptidases and inhibitors [BR:
palz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118058615
Ubiquitin system [BR:
palz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118058615
Exosome [BR:
palz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118058615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_DHX29
UBA_4
UBA_8
Motif
Other DBs
NCBI-GeneID:
118058615
NCBI-ProteinID:
XP_034927230
LinkDB
All DBs
Position
1:complement(46524326..46533803)
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AA seq
805 aa
AA seq
DB search
MDLLRSNLSRVRIPEPTNRIYKQECCVSFETPRSEGGLFVDMTTFLAFGKDYVGWNYEKT
GNPVYLHIKQTRKVVPEDRPLKKPTLLAIGVEGGFDNTEPEYEENHNIVILPDYVTLPFP
SVELPEKVRLAVDAIIMAEGAERKEQLAAWIAADKKQVSAYAMSLPQIDNGVVIPPSRWK
CAKCDKKDNLWLNLTDGMILCGRKNWDGTGGNNHAIEHYKETSYPLAVKLGTITADLEAA
DVFSYPEDDSVVDPLLAQHLAFFGIDFSALQKTEMTTAERELDQNTNYDWNRIQESGQDV
EPIFGPGYTGLVNLGNSCYMAATMQVVFSTRSFNSRFYINQSLKMAFEMAPADPTVDLNM
QLTKLAHGMLSGKYSVPALENDDKANAITSTSNEGIPPRMFKAVIAASHPEFSSMRQQDA
LEFFLHFLDQVERVNGGKPALDPSRSFKFGIEERILCPSGKVGFNRRLDYILSLNIPLHE
ASNKEELEAFSKLKAEKTSEGKDLSSDEIVRPRVPLEACLANFSAPEEIQDYYSTALKAK
TTALKIAGLTSFPDYLVLHMRKFVLEEGWVPKKLDVYIDVPDIIDISYMRSKGLQPGEEL
LPDDVPEAEVESNMPLANEDIVSQLVSMGFNYLHCQKAAINSSNAGVEEAMNWLLSHMDD
PDIDAPVSQGAHGNEVMDQLKVDTLLSFGFQEEIARKALKASGGDIEKATDWIFNNPDAS
VSSDMETSTSSSKPAPDDTELPDGGGKYKLFGIVSHMGTSTHCGHYVAHILKDGRWAIFN
DSKVAVSVNLPKDMGYLYFFERLDS
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggacctgctccgatcaaatctctcacgggttcggatccccgaaccaactaatcgcatc
tacaagcaggagtgctgcgtctctttcgaaactccgaggtctgaaggcgggttgtttgtc
gacatgactacgtttcttgcttttgggaaagattatgtgggttggaattatgagaagact
ggaaacccggtttatttacacataaagcaaacaaggaaggtggtccctgaagataggcct
ttgaagaaaccaactcttttggctataggtgtcgaagggggatttgacaacactgaacct
gaatatgaagaaaatcacaatatagtgatattacctgattatgttactttaccattccct
tcagtggagttgccagagaaggtgaggttggcagttgatgctatcataatggctgaaggt
gctgagaggaaagagcaacttgctgcctggatagctgctgacaagaagcaagttagtgca
tatgcaatgagtttaccacagattgacaatggtgttgttattccaccatccaggtggaaa
tgtgccaagtgtgacaaaaaagataatttgtggctgaatcttactgatggaatgattctt
tgtgggagaaaaaattgggatggaactggaggcaacaaccatgccattgaacattacaag
gagacaagctaccctcttgctgtgaagcttgggacaattactgctgatctcgaagcagca
gatgttttctcttatccagaggacgatagtgttgtggacccacttttagcacaacacctg
gcattttttggcattgatttttcagccttacaaaagactgaaatgacaactgctgagagg
gaacttgaccagaacaccaactatgattggaaccgaattcaagaaagtggacaggatgtg
gaacccatttttggaccaggttatacaggacttgtgaatcttggaaacagctgctacatg
gctgcaacgatgcaagttgtgttttcaactcggtccttcaattcacgattctacattaac
caaagcttgaaaatggcatttgagatggctcctgctgatccaactgtagacttgaatatg
cagcttacaaagctggcacatggtatgctttctggaaagtactcggttccagcactggag
aatgatgataaagctaatgccattacctcaacaagcaatgaaggtataccccctcgtatg
ttcaaagcagttattgctgccagccatcctgagttttcttctatgaggcaacaggatgca
ttggaattcttcctacactttcttgaccaagttgaacgtgttaatggtgggaaacctgca
ttggatccttcaagaagcttcaagtttggaattgaagaacgtatcttgtgtccatctgga
aaagttgggttcaatagaaggcttgactatattctttctttgaatattccactacatgaa
gctagtaataaagaagaactggaagccttcagcaaattgaaagcagaaaagacttctgaa
ggaaaggatttgtccagtgatgaaattgtacgtccaagggttcccctagaagcatgtcta
gctaatttttcagccccagaggagatacaagattattatagcactgccttgaaggccaag
acaacagcactgaagattgctggtctaacttcattccctgattatttggtgctgcacatg
cggaaatttgttttggaggaaggctgggtgccaaaaaagcttgatgtctacatagatgtt
cctgatatcatagacattagctacatgcgaagcaaaggccttcaaccaggggaggagttg
ttaccagatgatgtccctgaggcagaggtggaatcaaatatgcctttggccaacgaggat
attgtttcccagcttgtctccatgggtttcaactatcttcattgccagaaagctgctata
aattcatcaaatgctggagtagaagaggctatgaattggttactttctcacatggatgac
ccagatatagatgctcctgtttcccagggcgcacatggtaatgaagtcatggatcaattg
aaagttgatactttactctcatttggttttcaagaagaaattgctcggaaggcactgaag
gcttcgggtggtgacattgaaaaggccactgattggatattcaacaatcctgatgcttct
gtttcatctgacatggaaacttccacatcaagctctaaacctgctccagatgatactgag
ctgcctgatggtggagggaaatacaaactttttgggatagtgagccacatgggaacctcc
acccactgtggacactacgttgctcacatactgaaagatggcagatgggcaatcttcaat
gacagcaaggttgcagtctccgtaaacctccccaaggacatgggatatttgtacttcttt
gagaggcttgacagctga
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