Populus alba (white poplar): 118058814
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Entry
118058814 CDS
T07314
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
palz
Populus alba (white poplar)
Pathway
palz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118058814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118058814
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
118058814
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
HECT type E3
118058814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
Arm
HEAT_EZ
TFIIA
Motif
Other DBs
NCBI-GeneID:
118058814
NCBI-ProteinID:
XP_034927457
LinkDB
All DBs
Position
9:10776437..10786434
Genome browser
AA seq
1890 aa
AA seq
DB search
METRSRKRAEASSSAATNTTGTTTRSNKRSRTNAATATATTTTATATRSRSTRAHPLPMD
STPVESSSSSRSRRNRNNNSNSESEKGKEKEHEVRVSRENREISNNLDSGNDNNNPNVDD
DDDDDSEGGGIAAFHQNLTSASSALQGLLRKLGAGLDDLLPSPVMGSGSSSHQSGRLKKI
LSGLRADGEEGKQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLLNNESNPDIMLLA
ARAITHLCDVLPSSCAAVVHYGAVSCFVARLITIEYMDLAEQSLQALKKISQEHPTACLR
AGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVL
EHASVCLTRIAEAFASSPDKLDELCNHGLVTQAASLISTSSSGGGQASLSTPTYTGLIRL
LSTCASGSPLGAKTLLLLGVSGILKEILSGSGVSANSPVPPALSRPADQIFEIVNLANEL
LPPLPHGTISLPTSSSMLVKGSVVKKSPSSSSGKQDDINGNVPEVSAREKLLNDQPELLQ
QFGMDLLPVLIQIYGSSVNSPVRHKCLSVIGKLMHFSNAEMIQSLLSMTNISSFLAGVLA
WKDPHVLVPALQVAEILMEKLPGTFSKIFVREGVVYAVDQLILAGNPNTASTHGSSAEKD
NESVPGTSSRSRRYKRRSGSSNPEANSSEESKNPISANAGSPPSSIEIPMVNSNLRMAVS
ACAKAFRDKYFPSDPGAAEDGVTDDLLHLKNLCTKLNAGVDDQKTKAKGKSKASASRLID
SSTNKEEYLIGVISEMLAELGKGDGVSTFEFIGSGVVATLLNFFSCGYSTKEKISEANLP
KLRQQALRRFKSFAILALPSSIDEGGAAPMAVLVQKLQNALSSLERFPVVLSHSSRSSSG
GARLSSGLSALSQPFKLRLCRAQGEKALRDYSSNVVLIDPLASLAAVEEFLWPRVQRSET
GHKASASAGNSESGTAQPGAGASSPSTSIPASATRRHSSRSRSSVNIGDSARKEPIPEKS
TSTSKGKGKAVLKPPLEETKGPQTRNAARRRAAIDKDAQMKPVNGDSSSEDEELDISPVE
IDDALVIEDDDISDDDDDDHEDVLRDDSLPVCMPEKVHDVKLGAASEDSNVAPPASDSQS
NPASGSSSRAVAVRGSDSTDFKSGSSYGSRGAMSFAAAAMAGLGSANGRGIRGGRDRQGR
PLFGSSSDPPKLIFTAGGKQLNRHLTIYQAIQRQLVLEEDDEDRYGGRDFISSDGSRLWS
DIYTLAYQRADGQADRASVGGPSSSASKSIKGGSSNSNSDTQVHRMSLLDSILQAELPCD
LEKSNPTYNILALLRILEGLNQLAPRLRVQLVSDNFSEGKISSLDELMTATGVRVPAEEF
INSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALY
RLQQQQGADGHGSANEREVRVGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFG
EVGTGLGPTLEFYTLLSHDLQKVTLGMWRSNSAAEKPSMELDGDDDKNGKSNNESGTAVA
ADLVQTTLGLFPRPWPPTASASEGSQIYKTIEYFRLVGRVMAKALQDGRLLDLPLSMAFY
KLVLGQELDLYDILSFDAEFGKTLQELHALVCRKHYLESIGSDHEAIGDLHFHGTPIEDL
CLDFTLPGYPDYILKPGDETVNINNLEEFISLVVDATVKTGITRQMEAFRDGFNQVFDIS
SLQIFTPQELDYLLCGRRELWEPDTLVDHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRA
FCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSSAGNAMPNGTGPSESADDDLPSVMTCANY
LKLPPYSTKEVMYKKLLYAISEGQGSFDLS
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcgtagccggaaacgggcggaggcctcctcatctgccgccaccaacaccacc
ggtaccactactcgctccaacaaacgatcccgcaccaacgctgccaccgcaacagcaacg
acaacaaccgccaccgctacccgctctcgctccacacgtgctcaccctctccccatggac
tccacacctgttgaatcgtcttcttcttctcgctcgcgtcggaataggaacaataatagc
aatagtgaatcggagaaaggcaaagagaaagaacatgaagttagggtttcgcgtgaaaat
agggaaatcagtaataatttggattctggaaatgacaacaataaccctaatgtcgatgat
gacgatgatgatgacagcgaaggcggtggaattgctgctttccatcagaatttgacttca
gctagtagtgctttacagggtttgttgagaaagttgggtgccggtcttgatgatttactg
ccttctccagtgatgggttcaggttcaagctcgcatcaatcagggagattgaagaagatt
ttgtctgggttaagggcggatggagaagaagggaagcaagtggaagctttaacgcagctt
tgtgaaatgctttctatcgggactgaagagagtctgagtactttttctgtggattccttt
gttccggttcttgttgggttgttgaataatgagagtaatcctgatattatgttgcttgct
gcaagggcgattactcatttgtgtgatgtcttgccttcgtcttgtgctgctgttgttcat
tatggcgctgtttcgtgttttgttgcaaggttgattactattgagtacatggaccttgct
gaacagtctctgcaagctctaaagaagatatctcaagagcacccaactgcatgtctgcga
gcaggtgctcttatggcagtgctttcttatcttgattttttttctactggagttcagcga
gtagcattatctactgctgcaaatatgtgcaagaaacttccttcagatgcagctgacttt
gtgatggaagcagttcctctgttgaccaatcttcttcagtaccatgatgccaaggttttg
gagcatgcttcagtttgtttgacaaggattgctgaagcctttgcctcatctccagacaaa
ttagatgaactgtgtaatcatggacttgtcacacaagctgcctctctcatttccactagc
agttctggtggtggacaggcttctctcagcactccaacatatacgggtttaattcgactg
ctatccacttgtgcaagtgggtctcctttaggagccaaaacattacttcttcttggtgtc
agtggcattcttaaagagatactatcaggttctggggtttctgctaactcccctgttcct
cctgctctaagtcgacctgcagatcagatttttgagattgtcaatctggcaaatgagctt
cttcctccacttccacatggaactatctctctcccaaccagctctagcatgttggtcaaa
ggatctgttgtgaagaagtctccttccagtagttctgggaagcaagatgacatcaatgga
aatgttcctgaggtctcagctcgtgagaaattattaaatgatcaaccagaacttctgcag
caatttggaatggaccttcttcctgttctgatacagatttatggttccagtgtcaacagt
cctgttcgccacaagtgtctctcagttattgggaagttgatgcacttcagcaatgcagag
atgattcagtctctacttagcatgacaaacatatcaagtttcctagctggggtgttagca
tggaaagatccacatgtcttggttcctgcccttcaagtagccgagattcttatggaaaaa
cttcctgggactttctccaagatttttgtcagagaaggtgtggtttatgctgtagatcaa
cttatcttagctggaaacccaaatactgcttctacccatggttcttctgctgaaaaggat
aatgagtctgttcctggaacttcatcacgttccaggcgttacaaacgtcgcagtgggagc
tcaaatcctgaagcaaattcatctgaagaatccaaaaatcctatttctgcaaatgctggc
tcacctccaagttctatagaaatcccaatggtcaattcaaatttgcgaatggcagtcagt
gcatgtgctaaagctttcagagataagtacttcccctcagatcccggggctgctgaagac
ggggttactgatgaccttttacacttgaagaatctctgcacaaagttgaatgctggtgtt
gatgaccaaaagactaaagcaaagggaaaatcaaaggcttctgcatcccgtcttattgac
agctccacaaataaggaagagtacttgattggggtgatatccgagatgctagcagagctt
ggcaaaggggatggtgtatccacttttgagtttattggcagtggtgttgtggcaaccttg
ctgaattttttttcttgtggctattctactaaggagaaaatttcagaagctaacctgcca
aagcttcggcaacaagcactaagaagatttaagtcatttgctattctggcccttccttcc
agcattgatgaagggggtgcggcacccatggctgtcttagttcagaagcttcaaaatgct
ttgtcatccttggagcgtttccctgttgttctgagccattcttctaggtcatctagtgga
ggtgcacgcctgtcttctggattaagtgcactatctcaaccttttaagttgcgtctctgt
cgggcccaaggggaaaaggctctccgtgattactcttccaatgttgtacttattgatcca
ttagcaagtttagctgccgtagaagaatttctttggccgcgagtgcagcgaagtgaaact
ggtcacaaggcttcagcatctgcaggaaactctgaatctgggactgcacagcctggagct
ggtgcatcatctccatctacctctatccctgcttctgctactcgtcgtcattcttcaaga
tccagatcatctgttaatataggagattcagctagaaaggaaccgataccagagaaaagc
acaagcacatcaaagggaaagggcaaagctgttttgaaaccacccctggaggagacaaaa
ggacctcaaactagaaatgctgctcgtagaagagcagccattgataaagatgcacaaatg
aaacctgtgaatggggattctagttctgaggatgaggaattggatatatctcctgttgag
atcgatgatgcattggtgattgaagatgatgacatctctgatgatgacgatgatgaccat
gaagatgtgttaagagatgattctcttcctgtttgcatgcctgaaaaggtacatgatgtg
aaactgggtgctgcatcagaggatagcaatgttgcaccaccagcaagtgacagccaaagt
aatcctgcttctggttctagtagcagggctgttgctgttaggggttcggattccactgat
tttaagagtggtagttcttatggatctaggggagctatgtcatttgccgccgctgccatg
gctgggcttggatctgctaatggcagaggcatcaggggaggaagagatcgacaaggacgt
cccttgtttggtagctctagtgaccctccaaagttaatctttactgctggtgggaagcaa
ctgaataggcatttgacaatctatcaggccatccagcgacaacttgttctggaagaggat
gatgaagacaggtacggtggcagggattttatctccagtgatgggagtaggctttggagt
gatatatatacccttgcatatcaaagggcagatggccaagctgatagggcttctgttggg
ggcccaagttctagtgcatcaaagtctatcaaaggtggctcgtccaattcaaactcagat
acccaagtgcaccgcatgtcacttttagatagcatcttgcaagcggaacttccttgtgat
ttggaaaaatctaatcctacttataatatattggctctactacgtatacttgagggtttg
aaccagcttgctcctcgtctgagagttcagctagtttctgacaacttttctgaggggaaa
atctcaagcttggatgagttgatgactgctactggtgtcagggttcctgctgaagaattc
ataaatagcaagctcacacctaaattagctcgacaaattcaagatgcccttgctctgtgc
agtgggagccttccgtcatggtgttatcaattaacaaaagcatgcccattcctgttccct
tttgagacccggcgacaatacttctattcaactgcttttggattatcccgtgctttgtat
cgtcttcagcagcagcagggggctgatggtcatggatcagcgaatgaaagagaggtgagg
gttggaagattacaacgccagaaagttcgtgtgtcccgaaaccgtattttggattctgct
gcaaaagtaatggagatgtattctagccagaaggctgtgcttgaagtagaatattttggt
gaggttggtacagggttgggtcccaccttagagttctacacgcttttgagtcacgatctt
cagaaagtcactcttggaatgtggaggtcaaattcagcagcagagaaaccttcaatggaa
cttgatggagatgatgacaaaaatggaaaatccaataacgaatctggtactgctgttgct
gcagatcttgtccagactacacttggtttgttccctcgtccttggccgccaactgctagt
gcttctgaggggagccaaatatataagaccatcgagtatttccggctggttggacgggtg
atggccaaagctcttcaagatggacggcttttggacctaccactttcgatggcattttat
aagctcgtgcttggtcaagaacttgatttgtatgatattctttcgtttgatgctgaattt
gggaagactttacaagaattgcatgcccttgtttgtcggaaacattatttagaatcaata
gggagtgatcatgaagccattggtgatttacattttcatgggaccccgatagaagatctc
tgcttggattttactcttccgggctatccagactacattttgaagccaggagatgaaact
gtcaatatcaataacttggaggaattcatatccttggtagttgacgcaactgtcaagact
gggattacgcgacaaatggaagcatttagagatgggttcaatcaggtttttgacatctcc
tcattgcaaatattcactccacaagaattggattatttgctttgcggtcgcagagagttg
tgggagcctgatacacttgttgatcatataaaatttgatcatggatacactgccaagagt
ccagccattgttaacctgcttgagattatgggagagtttacaccggatcagcagcgtgca
ttctgccagtttgttactggggcacccaggctaccacctggaggtctggctgtcctaaac
ccaaaattaaccattgtgagaaagcattcttcatctgcagggaatgcaatgccaaatgga
actggaccttcagaatcagctgatgatgacttgcccagtgtcatgacttgtgctaattac
ctaaagcttcctccttactctaccaaggaagttatgtacaagaaattgctgtacgcaatc
agtgaagggcagggatcttttgatctgtcatga
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