Populus alba (white poplar): 118058823
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Entry
118058823 CDS
T07314
Name
(RefSeq) WD-40 repeat-containing protein MSI2
KO
K10752
histone-binding protein RBBP4
Organism
palz
Populus alba (white poplar)
Pathway
palz03082
ATP-dependent chromatin remodeling
palz03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118058823
03083 Polycomb repressive complex
118058823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
palz03036
]
118058823
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
118058823
Histone modification proteins
HAT complexes
HATB complex
118058823
HDAC complexes
Sin3A-HDAC complex
118058823
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
118058823
PRC2.2
118058823
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
118058823
Heterochromatin formation proteins
Other heterochromatin formation proteins
118058823
Chromatin remodeling factors
NuRD complex
118058823
NuRF complex
118058823
NuRF complex (fruit fly)
118058823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
WD_LRWD1
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
MIOS_WD40
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
DUF6922
Motif
Other DBs
NCBI-GeneID:
118058823
NCBI-ProteinID:
XP_034927467
LinkDB
All DBs
Position
9:complement(10827215..10831359)
Genome browser
AA seq
418 aa
AA seq
DB search
MAPVEDDQDVGQDQLDEEFSVWKKNTPFLYDFVISHPLEWPSLTVQWVPLATPLPHSTDP
SSFSVHKLVLGTHTSDDSPNYLLIADAVLPTSVAEAKIDTSGSSTNSVVPKVEITQKIRV
DGEVNRARSMPQNPAIVGAKTSGCEVYVFDSTKQAERKQRNGCDPDLRLTGHDKEGYGLS
WSPFKQGYLVSGSHDNRICLWDVSAVAQDKVLGALQVYEAHESVVEDVSWHLKNENLFGS
VGDDCQLIIWDLRTNQIQHSVKAHEKEINYLSFNPYNEWILATASSDATVGLFDMRKLTV
PLHALRSHTEEVFQVEWDPNHETVLASSADDRRLNVWDLNRIGEEQLELDADDGPPELLF
SHGGHKAKISDFSWNKNEPWVISSVADDNTLQVWQMAESIYRDEDDIASAEEPPLAEK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcaccggtggaggatgatcaggatgtgggacaagatcaacttgatgaagaattctct
gtatggaagaagaacacgccatttctctatgacttcgtcatctctcaccctctcgagtgg
ccatctctaaccgtccaatgggtaccactcgcaactccactgcctcactcaaccgacccg
tcgtctttctccgttcacaagctggttcttgggactcacacttctgatgattcccccaac
tatctcttgattgctgatgctgtgctgcccacttcggtcgccgaagccaagattgacact
agtggcagttctacgaattctgtggttcctaaggtggaaattacacagaagattcgagtt
gatggagaggtgaacagggcacgaagtatgccacaaaatcccgctattgttggtgcaaag
actagtggttgcgaggtttatgtgtttgattctaccaaacaggcggagaggaaacaaagg
aatggctgtgatccggatttaaggttaactggccatgataaagaagggtatggattgtcg
tggagtccatttaagcagggttatcttgtgagcggttcacatgataatagaatatgtttg
tgggatgtgtctgccgttgctcaagataaagtgcttggtgcgttgcaagtttatgaggcc
catgaaagtgtggtcgaagatgtgtcatggcacttgaagaatgaaaatttgtttggttct
gtgggggatgattgtcaattaattatctgggacttgcgcacaaatcaaatccaacattct
gttaaagctcatgagaaagagattaactatctatcgttcaatccatacaatgaatggatt
ctggccacagcttcttctgatgcaactgttggtctgtttgatatgcggaagctgactgta
ccactgcatgctttacgtagtcacacagaagaggtattccaagtagaatgggatcctaat
catgaaacagtgctagcatcctctgctgatgacagaaggttgaacgtttgggatctgaac
aggattggtgaggagcagttagagctagatgctgacgacggcccaccagaacttcttttc
tctcacggaggtcacaaggccaagatatcagatttttcatggaataaaaatgaaccatgg
gtcatctcaagcgtggctgatgacaacacacttcaagtgtggcaaatggctgaaagtatc
tatcgtgacgaagatgacatagcatctgctgaggagccacctctagctgagaaatga
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