Populus alba (white poplar): 118059182
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Entry
118059182 CDS
T07314
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
palz
Populus alba (white poplar)
Pathway
palz03020
RNA polymerase
palz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118059182
09124 Replication and repair
03420 Nucleotide excision repair
118059182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palz03021
]
118059182
03400 DNA repair and recombination proteins [BR:
palz03400
]
118059182
Transcription machinery [BR:
palz03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
118059182
DNA repair and recombination proteins [BR:
palz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
118059182
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
118059182
NCBI-ProteinID:
XP_034927925
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All DBs
Position
9:8635120..8638439
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AA seq
323 aa
AA seq
DB search
MESVSYQRFPKIKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSS
VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV
TSKDLYSSDHAVIPVDFSDPSDANDPFDHTETQRGIIIVKLRRGQELRLRAIARKGIGKD
HAKWSPAATVTFMYEPEIHINEDLMETLTLEEKLSWIESSPTKVFDIDKVTQQVVVVDPE
AYTYDDEVIKKAEAMGKRGLIDIRAKEDSFIFTVESTGAVKASQLVLNAIEILKQKLDAV
RLSDDTVEADDQFGELGVHMRGG
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgtctcgtaccaacgcttcccaaaaatcaaaatccgagaaatgaaagatgac
tacttaaaattcgagctccgtgaaaccgacgcgtcaatggccaacgctcttaggcgcgtc
atgatcgccgaagttccaacaatcgcaatcgacctcgttgaaatcgaagtgaactcatcg
gtcttaaacgacgagttcattgctcaccgactcggcctcattcctctcaccagcgagcgc
gctatggggatgcgattctcgcgtgactgtgacgcttgtgatggtgacggccagtgtgag
tattgctctgttgagtttcatttgagagccaagtgtataacggaccagacgcttgatgtt
accagtaaggatctgtacagttcggatcatgccgttattcctgttgatttctctgatcct
tctgacgctaatgatcctttcgatcatacagagacgcagagggggattattattgtgaaa
ttgcgccgtgggcaagaactgagactgagggccatagctaggaaagggattgggaaagat
catgcgaaatggtctcctgcagcaactgtaacttttatgtatgaacctgagattcatatc
aatgaagatttgatggagactttgacacttgaggaaaaattaagttggattgaaagcagt
cctaccaaagtttttgatattgacaaagttacccaacaggttgtagtggttgatcctgag
gcctatacttatgatgatgaagtgattaagaaagctgaagctatggggaaacggggactc
attgatattcgtgccaaggaagacagtttcatatttactgtggaatctactggtgcagtc
aaggcttctcagttggttcttaatgctatcgagattttaaaacaaaagcttgatgctgtt
cgactttctgatgacactgttgaagccgatgatcagtttggtgaacttggtgttcacatg
cgcggaggttga
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