Populus alba (white poplar): 118059359
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Entry
118059359 CDS
T07314
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
palz
Populus alba (white poplar)
Pathway
palz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
118059359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118059359
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
118059359
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_14
LRR_NXF1-5
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
118059359
NCBI-ProteinID:
XP_034928095
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Position
2:19326735..19330130
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AA seq
584 aa
AA seq
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MPNKASTFPEEVLEHVLSFITNDKDRNAVSVVCKSWYEIERWCRKRIFVGNCYAVRPDMV
IRRFPELRSVELKGKPHFADFNLVPDSWGGYFYPWIVALATAYPWLEEIRLKRMVISDES
LEVIAKSFKNFKVLVLSSCEGFSTDGLSAIAAGCRNLRELDLRESEVDDPSGQWLNSFPD
SFTSLVSLNISCLGAELSFSALERLVGQCPDLNNLQLNHAVPVERLAKLIRQAPQLVELG
TGEFSAKLQPEIFSNLAGAFSVCKELRSLSGFWDVNPAYLPAVYPVCSGLTSLNLRYANI
KSADLNKLVSQCPNLQRLWVLDYIEDVGLEALAACCKDLTELRVFPSDPFAAEPNVSLTE
RGLVSVSEGCPKLQSVLYFCRQMTNAALVTVAKNRPSMTCFRLCIIEPQAPDYQTLQPLD
LGFGAIVENYKDLRRLSLSGLLTDRVFEYIGTYGKKIEMLSVAFAGDSDLGLHHVLYGCE
RLCKLEIRDCSFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLGQKMPRLNVEVIDER
GPPESRPESYPVEKLYIYRTIAGPRLDMPGFVWTMDADSVSRFS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgccgaataaggcgagtacgttcccggaggaagtgctagagcatgtgctatcgtttatt
acaaacgacaaagacaggaacgccgtatcggtggtgtgcaagtcgtggtacgagatagag
cggtggtgtaggaagagaatatttgttggtaactgttatgcggtgaggcctgatatggtt
ataaggaggtttccggagctaagatcggtggagctcaaagggaagccacactttgcggac
tttaatttggtgcctgacagttggggaggttacttttacccatggatagtggcattggct
accgcctatccttggttggaagagattaggttgaagaggatggtgatttccgacgagagt
ttggaggttattgctaagagttttaaaaattttaaggttttggtgctttcgtcttgtgag
ggtttctctacggatggactttctgccattgcagccggttgcaggaatctgagggagctg
gatttacgagagagtgaggtggatgatccaagtgggcagtggttgaacagttttcctgac
tcgtttacatcactggtctctcttaatatttcctgcttaggggctgagctgagtttctca
gctttggagcgcctggttggccagtgtcctgatctaaataatcttcagctcaaccatgct
gtgcccgttgagaggcttgctaaacttattcgccaagcaccacaactggttgaattgggc
acaggtgagttctcggctaagttgcagcctgaaatcttctcaaacctggctggagctttt
tctgtgtgtaaagaactgaggagtctatctgggttttgggatgtaaatccagcttacctt
ccagcagtttatcctgtctgttctggcttaacatcactgaacttgagatatgccaatata
aaaagcgctgatctcaataaacttgtcagtcaatgtccgaatctgcagcgtttatgggtg
ctggattacattgaagacgttggacttgaagctcttgcagcatgttgcaaggacctgaca
gagttgagggtgtttccatctgacccatttgctgcagaaccaaatgtatccttgacagaa
aggggccttgtctctgtctctgaaggctgtcctaagcttcagtcagttctgtacttttgc
cgtcaaatgactaatgctgctctagttacagtagcaaagaaccgtccaagcatgacctgc
ttccgtctttgtattattgaacctcaggctcctgattaccaaacacttcagcctctggat
ttgggttttggagccattgttgaaaactacaaggatctccggcgtctttccctctcaggt
ctactgactgatcgtgtgtttgagtacattggaacttatggaaaaaaaatagagatgcta
tccgtggcatttgctggcgatagtgatctgggactccaccatgtgctgtatgggtgtgaa
aggctttgcaaacttgaaattagggactgctcctttggggataaggctcttttggccaat
gctgcaaagctggagacaatgcgatccctttggatgtcttcttgctcagtgagttttgga
gcatgtaagctgctaggtcagaagatgcctaggctcaatgttgaagttattgatgagagg
ggacctccagaatcgaggccggaaagctaccctgttgagaagctttacatatacagaacc
attgcaggacctaggcttgatatgcctggatttgtttggactatggatgcagattctgtg
tcaaggttttcttga
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