Populus alba (white poplar): 118059465
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Entry
118059465 CDS
T07314
Name
(RefSeq) RNA-binding protein 208 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118059465
03041 Spliceosome [BR:
palz03041
]
118059465
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
118059465
Spliceosome [BR:
palz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118059465
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_5
RRM_Nup35
RRM_8
Motif
Other DBs
NCBI-GeneID:
118059465
NCBI-ProteinID:
XP_034928231
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All DBs
Position
18:188144..192945
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AA seq
426 aa
AA seq
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MQQQALLQHHHMYHHPALVASAMSQMEPILGGNLPPAFDPSSSCRRVYVGNIHVNVTDKL
LAEVFATAGPLAGCKLIRKDKSSYGFVDYHDQSSAALAIMTLHGRQLYGQALKVNWAYGN
SQREDTSGHFHVFVGDLSPEITDANLFACFSVFPSCSNARVMWDHKTGRSKGYGFVSFRN
QQEAQSAINDLTGKWLGNRQIRCNWATKGVESNEDKQNSDNQNAVVLTNGSSAEGGQEST
NEEAPENNPAYTTVYVGNLSHEVTQAELHRHFHALGAGVIEDVRVQRDKGFGFVRYNTHE
EAASAIQTGNGKIVCGKPVKCSWGSKSTPPGTASNPLPPPPPAQPYQIAPSTGINQGYSA
ADLLAYQRQLALSQAAASGLSGQALLQLTGQHGLAAASMDLSAGGSQAMYDGYHNGLAAQ
QLMYYR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagcaagcactgcttcaacatcatcacatgtatcatcatcctgctctcgtcgct
tctgccatgtctcagatggagcctatccttggtggtaatctgcctcctgcttttgatcct
tcttcttcttgtcgcagagtttatgtaggaaatattcatgtaaacgtcactgacaaactt
cttgctgaagttttcgcaactgctggccctcttgctggatgcaagctcatcagaaaggat
aagtcatcttacggttttgtggactaccatgaccaatcatctgcagcacttgcaataatg
acattgcatggacgccaactttatggtcaggcgcttaaagtgaattgggcatatggcaat
agccaaagggaggatacatcagggcatttccatgtatttgttggtgatttgagtccagag
attactgatgctaatttatttgcgtgcttctcagtctttcctagttgctccaatgcaagg
gtcatgtgggatcacaaaactggccgctcaaaaggatatggctttgtttcattccgtaat
cagcaggaggcacaaagtgctattaatgacttaactggtaaatggcttggaaacaggcag
ataagatgtaattgggcaactaaaggtgttgaatccaatgaagataagcaaaacagtgat
aaccaaaatgcagttgtacttactaatggatcttcagcagaaggaggtcaggaaagcact
aacgaggaggctcctgaaaacaatcctgcatacaccactgtctatgttggcaatctttcc
catgaggtcacccaggctgagctgcatcgtcattttcatgctcttggggctggtgtaatt
gaggatgttcgagtccagagagataaaggttttgggtttgtcagatacaacactcatgaa
gaagcagcctcagccattcaaacgggcaatgggaagatagtttgtggaaagcccgtgaag
tgctcatggggtagcaagtcaactcctcctggaacagcttcaaatccattgccacctcca
cctccagctcaaccatatcaaatcgctccatcaactggtataaaccaaggctactctgca
gctgatttgttggcctatcagcgccagctcgccttgagccaggctgctgcgtccggcctt
tcaggccaagctcttctccagctgaccggacagcatggcctagctgctgcttcaatggac
ctgagcgctggtgggtcccaagctatgtatgatggatatcataacggtttggctgctcag
cagctcatgtattaccgttag
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