Populus alba (white poplar): 118059609
Help
Entry
118059609 CDS
T07314
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
palz03036
]
118059609
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
118059609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_ELP1_1st
Beta-prop_IFT140_2nd
Beta-prop_SCAP
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
118059609
NCBI-ProteinID:
XP_034928413
LinkDB
All DBs
Position
4:19258889..19267960
Genome browser
AA seq
1037 aa
AA seq
DB search
MIAEKPSWVRHEGMQIFSIDIQPGGYRFATGGGDHKVRIWNMNSVSRDLEINEPTQRLLA
TLRDHFGSVNCVRWAKHGRYVASGSDDQVILVHERKPGSGTTEFGSGEPPDVENWKVAMT
LRGHTADVVDLNWSPDDSILASGSLDNTIHVWNMSNGICTAVLRGHSSLVKGVTWDPIGS
FIASQSDDKTVIIWRTSDWSLAHRTDGHWTKSLGSTFFRRLGWSPCGHFITTTHGFQKPR
HSAPVLERGEWVATFDFLGHNAPIIVVKFNHSMFRRNFANAQEVKAAQVGWTNGASKIGG
KESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGS
VATFHFDAKELGHKLSDIELDELKRSRYGDVRGRQANLAESAAQLLLEASAKETTNKKVA
LDIQQSQIPAKPSVDLGVIAKTSEPPVDGGKNSGGATGDGLNKVPTPAQISSPVKQREYR
RADGRKRIIPEAVGVSNQPETMIGGARSQSLDFPRVSSDHRKVENGIGSVDGGLRESSIR
GTLVRNSDLKERSVVTARATVTESLVIEKVPGSAGRDGSINVEPFGSVKASSSSSSCSTP
ISIRVFDKKIGEDAIPISLKACPREHAVNDIVGVGNTCIMKETEIVCTRGAETLWSDRIS
GKVTVLAGNANFWAVGCEDGCLQVYTKCGRRAMPTMMMGSAATFVDCDECWKLLLVTRKG
SLYVWDLFSRSCLLQDSLASLITSDPNSVKGTIKVISVKLSKSGSPLVVLATRHAFLFDM
SLMCWLRVADDCFPASNFAGSWSLGLIQSGELAALQVDVRKFLARKPCGSRVTDDGVQTR
AHLEAQLESSLALKSPNEYRQCLLSYIRFLAREADESRLREVCESFLGPPTGMAESTSSD
AKTVSWDPCVLGMRKHKLLREDILPAMASNRKVQRLLNEFMDLLSEYESAETKLDQKTPM
LPTTSQQATSQMDCDPPVTEQAIDHTNSAQPEKDHEDHTPIITDEADCTLLANDQVDTCP
MVTDQVIPDSLDRDAGS
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgattgcggagaaacccagttgggttaggcatgaaggaatgcaaattttctccattgat
attcagcctggtggctataggtttgctactggtggaggtgaccacaaggttcggatatgg
aacatgaattctgttagcagagaccttgaaattaatgaaccaacacaaaggctgcttgca
actctccgtgaccacttcgggtctgtcaattgtgttaggtgggctaagcatggtcgttat
gttgcatcagggtcagatgatcaagttattttagttcatgaacggaagcctggttcagga
accacagagtttggcagcggagagcctcctgatgttgagaattggaaagttgcaatgaca
ttgagaggccatactgcagatgtggtggatcttaattggtctccagatgactccatattg
gctagtgggagtttggacaacaccatccatgtctggaatatgagcaatggcatttgcact
gctgttctcagaggtcactctagcctagttaaaggagttacttgggatcccattggctct
ttcatagcaagtcaatccgatgacaagacggttattatatggcgaacaagtgactggagt
ctggctcacagaacagatggccactggactaaatcacttggatctacgtttttcaggcgc
ctaggatggtccccctgtggtcattttataactacgactcatggtttccagaagccaagg
cattctgcacctgttctcgagagaggggaatgggttgccacattcgatttcctaggacac
aatgcccccattattgtggtaaagtttaaccattcaatgtttagaaggaattttgccaat
gcccaggaagtgaaagctgcacaagttgggtggactaatggggcctcaaagattggaggg
aaagaatcacagccgtacaatgttattgcaattgggagtcaagatcgcaccataactgta
tggactactgcaagtccgcgtcctctttttgtggccaagcacttctttactcaaagtgtt
gtagatttatcctggagtcctgatgggtattcactttttgcgtgttccttggatggttcg
gtggctactttccattttgatgctaaagaacttggacacaagctaagcgatattgaactt
gatgagttaaaaagaagtcgttatggtgatgtcagaggtcgacaggcaaacctagcagag
agtgctgcacagttattgctcgaagcatcagccaaagaaacaacaaacaaaaaagtggca
ttggatattcagcaaagtcagatacctgcaaaaccttctgttgacttgggggtcattgca
aagacttctgagcctccagttgacggtggcaagaatagtgggggagccactggtgatggt
ttgaataaagtgccaactcctgcccagatttctagtccagtaaaacaaagagaatacaga
cgtgctgatggtagaaagaggatcattccagaagctgtaggagtttctaatcaaccagaa
acaatgattggtggggcccggtctcaatctcttgatttccctcgtgtgtcatctgatcac
agaaaggttgaaaatggaataggttctgttgatggtggtttgcgagagagttctatcagg
ggaacacttgtcagaaactctgatttaaaagagcgctctgttgtcactgcaagggctact
gttactgagagccttgttattgagaaggttccaggttctgcgggaagggatggaagcatc
aatgtggaaccgtttgggagtgtgaaggcatccagttcctccagttcttgtagcacccct
atctcaatcagggtatttgataagaaaataggagaagatgccataccaatatccttgaaa
gcttgtcctagagaacatgcagtaaatgacattgttggggtgggcaatacatgtataatg
aaagaaacagaaattgtttgcacaagaggggctgaaactctctggtctgataggatctca
ggaaaagttactgttttagctggaaatgcaaacttctgggcagttggttgtgaagatgga
tgcctacaggtttacacgaagtgtgggagacgtgccatgccaaccatgatgatgggatct
gcagcaacttttgtagattgtgatgagtgctggaagttgttgctggtcacaaggaaggga
tctttgtatgtatgggatttgtttagtcggagttgtctccttcaggattctttggcatct
ctaattacctcagacccaaactctgtaaaagggacaatcaaagttatatctgtgaagtta
tcaaaatctggttctcctcttgttgttttggccacacgtcatgccttcctctttgacatg
agtcttatgtgttggctaagagtggcagatgactgcttccctgcatcaaattttgctggc
tcctggagcttgggtttgattcagagtggtgagctagctgcattgcaggtggatgtcagg
aagtttttggccagaaaaccatgtgggagcagagtgacggatgatggagtgcagacacgt
gctcatttggaggctcagttggaatcctctttggctttaaagtcccctaatgaatatcgc
cagtgccttctatcttacattcgcttccttgcaagagaagcagatgagtctcgtttacga
gaagtctgtgagagttttctaggacctcctactgggatggctgaatccacgtcttcagat
gcaaaaactgtgtcttgggatccttgtgtgcttggaatgagaaagcataaactcttaaga
gaagatattcttccggcaatggcatcaaatagaaaagtccaacgtttgctaaatgagttc
atggacctcttatctgaatatgagagtgcagaaactaagctggaccaaaaaactcccatg
ctaccaactacatctcaacaagcaacgagtcaaatggattgtgatccacctgtaacagag
caagcaatagatcatacaaactctgcccagccagaaaaagatcacgaggaccataccccc
attataactgatgaagctgactgcactctgctggcaaatgatcaagtagatacatgcccg
atggtaacagatcaagttattccggattctcttgacagagatgctggttcttga
DBGET
integrated database retrieval system