Populus alba (white poplar): 118059695
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Entry
118059695 CDS
T07314
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118059695
04121 Ubiquitin system [BR:
palz04121
]
118059695
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118059695
Membrane trafficking [BR:
palz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
118059695
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118059695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-C3H2C3
zf-HC5HC2H
Prok-RING_4
CxC4
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
118059695
NCBI-ProteinID:
XP_034928520
LinkDB
All DBs
Position
10:18702186..18704000
Genome browser
AA seq
403 aa
AA seq
DB search
MSSPTTPSYWCYRCNRFVQVWRQDSVTCPECESGFIEEIENPPHMIQTEASRERHRRLSP
AAGTMFMIGNRSNPHRRNRSGGAAGSGDRSPINPVIVLRGGPGGAAEDVVGDDGGRGGGG
FELYYDDGGGSGLRPLPPSMSEFLLGSGFERLLDQLTQIEMNGGFGRYENQHPPASKSAI
ESMPTVIINESHIFTESHCAVCKEAFELESEAREMPCKHIYHTDCILPWLSIRNSCPVCR
HELPSGDDDGEDGVGSPLPEAGNGQGNNEEEAVGLTIWRLPGGGYAVGRFAGARRGEREL
PVVYTEMDGAFNNGGLPRRISWGSRGGGRRENGGGVNGGRDGGNRGFGFGRVLRHWFACF
GVGRGSSSNSRVTGRNRPSPVLSSSSSMRRRGWGAEINTGRRR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctccaaccacgccgtcgtattggtgctatagatgcaaccgtttcgttcaggtc
tggagacaagactcggtaacttgcccagaatgtgaatccgggttcattgaagaaatcgaa
aaccctccgcacatgattcaaacagaagcatcacgtgaaaggcaccgcagactttcgccc
gctgctggaacgatgttcatgatcggtaaccgctcaaacccccatcgtcggaaccgtagc
ggtggagccgccggtagcggagaccggtccccgatcaatccagtgattgtacttcgtggt
gggcctggaggggcggcggaggacgtagtgggagatgacggtggccgcggtggtggaggg
tttgagctttattatgatgacggtggtgggtccgggttgaggccgttgccgccgagcatg
tcggaatttttattgggatcagggtttgagagattgttagatcagttaacacagattgaa
atgaatggagggtttggccgctatgagaatcagcacccaccggcgtcaaagtcggcgatt
gaatcgatgcctacggtaattattaacgaatctcatatttttaccgaatcgcattgtgct
gtttgcaaggaggcttttgaattagaatccgaagcacgagagatgccttgtaaacatatc
tatcatactgattgtatacttccttggttatctattcgtaattcttgtccggtttgtcga
catgaattgccttctggtgatgacgacggtgaggatggggttgggagtccgttacctgaa
gcagggaatggacagggaaataacgaggaggaggcagttgggctgacgatatggaggtta
cctggaggagggtatgcggtggggaggtttgcgggggcgaggaggggagaaagagagttg
cccgtggtttatacagagatggatggtgcgtttaacaatggtggattgccgaggaggata
tcttgggggtctagagggggtggaaggagggagaatggtggtggggttaatggtggtaga
gacggtggtaatagagggtttggttttgggagagttttgaggcattggtttgcttgtttt
ggcgtaggacggggttcgagttcaaactccagagtcaccgggaggaataggccttctcct
gttcttagcagttcctcttcgatgaggagaaggggttggggcgctgagattaatactgga
aggagacggtga
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