KEGG   Populus alba (white poplar): 118059715
Entry
118059715         CDS       T07314                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
palz  Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:palz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:palz03400]
    118059715
DNA repair and recombination proteins [BR:palz03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    118059715
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-RING_UBOX DEAD Prok-RING_4 RING_XB3-XBAT31 zf-RING_5 zf-C3HC4_4 ResIII zf-ANAPC11 zf-RING_4 UBA_Rad5
Other DBs
NCBI-GeneID: 118059715
NCBI-ProteinID: XP_034928559
LinkDB
Position
4:complement(19616727..19625438)
AA seq 1037 aa
MGTKLTEELVSTVRSIVGCDFSDMDIIRALHLAKNDPTAAINIILDTPNFISKQKNLTPK
TPNPKSKTVPYKPPNFVVKDNGNRNSSQNLEVNCVENDATDSTVGDNGSVSGLAGSEWWF
VGCGEVAGLSTCKGRRVKAGDEVDFTFPLKSKSSISPSPSPGKGSGRRRQAATACSEIVR
FSTKDSGELGRIPNDWARCLLPLVRDGKVRIMGCCKSAPNVLGIMDTIQLSISVYLNSVM
FHKHHRTSLKATANSTEETVGHPLSILFSLLGLTPFKKAEFTPADLNTRKRPLNSKDGSG
LPVSLLNANKSKNQSGNGNEIENEESVSDADLENIVGGGDNSELEEMDPPSTLQCELRPY
QKQALHWMIQLEKGKCMDGAATTLHPCWEAYHLADKRELVVYLNVFSGDATIEFPSTLQM
ARGGILADAMGLGKTIMTISLLLTHSDKGGLSNSQSGSQLCTGGGSSDNSDQHPNQLNKA
TKFSGIDKLKQTKMLVNGGNLIICPMTLLGQWKAELEIHAQPGSLSVYVHYGQSRVKDAN
FLAQSNVVITTYGVLASDFSAEGAVGNGGLYSVHWFRVVLDEAHTIKSSKSQISMAAAAL
VADRRWCLTGTPIQNSVEDIYSLLRFLKVEPWENWAWWNKLVQKPFEEGDERGLKLVKSI
LKPIMLRRTKTSRDREGRPILVLPPADVKVIYCQLTEAEKDFYEALFKKSKVKFDQFVEQ
GRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEYSDLNKLAKRFLKGDQVVLEGEAIN
VPSRAYIKEVVEELSKGDQGECPICLEACEDAVLTPCAHRLCRECLLASWRNASSGLCPV
CRKAITRQELITAPTDSRFQIDIEKNWVESSKIVALLQELEILRMSGSKSILFSQWTAFL
DLLQIPLSRSNISFVRLDGTLNQQQRERVIKQFSEDDSILVLLMSLKAGGVGVNLTAASN
AFVMDPWWNPAVEEQAVMRIHRIGQTKRVMIRRFIVKGTVEERMEAVQARKQLMISGALT
DQEVRTARIEELKMLFT
NT seq 3114 nt   +upstreamnt  +downstreamnt
atgggaaccaagttaaccgaagagctagtctccaccgtccgatcaatcgtaggctgtgat
ttctccgatatggacataattagagctctccacttggcaaaaaacgaccccaccgctgca
atcaacatcatccttgataccccgaattttatttccaaacaaaaaaacctaacccccaaa
accccaaatccaaaatctaaaaccgtaccctacaagccacccaattttgtcgttaaagac
aatggaaaccgtaactcgagccagaatttagaagtcaattgcgttgaaaatgacgcgact
gacagcactgttggtgataatgggagtgtttcgggtttggctgggagtgaatggtggttt
gttggttgcggtgaagtggcggggttgtcgacgtgtaaagggaggagagtgaaggctggt
gatgaagtggatttcacatttcctttgaagagtaaaagttcgatttcgccttcgccttcg
cctggtaagggttctgggaggagaaggcaggctgcgacagcgtgctcagagattgttagg
ttttctacaaaagatagtggagagcttggtcgaatacctaatgattgggcacggtgtctt
ttgccgcttgttagagatggaaaggtcaggattatgggatgttgtaaatctgctcctaac
gtgctaggcataatggatacaattcaattatcaataagtgtatacttgaatagtgtaatg
ttccacaagcaccaccggacctcacttaaagcaactgccaattccactgaagaaacagtc
ggtcatcctctttcaatccttttcagcttgcttggcctgaccccttttaagaaggcagaa
tttacgcctgctgatttgaacacaaggaagcgacctctgaactcaaaggatggttctggt
cttcccgtgtcattgttaaacgccaacaagtctaagaatcaatctggaaatggaaatgaa
attgagaatgaggagtccgtttcagatgcagatcttgagaatattgttggcggtggagac
aactctgagttagaggaaatggatcctccaagtacgctccaatgtgagcttcgtccctac
caaaagcaggccctacattggatgattcagctggagaagggaaaatgcatggatggggca
gcaacaactcttcatccatgttgggaggcttatcatttagcagacaagagggagcttgtt
gtctatctgaatgttttttcaggtgatgctacaatagaatttccaagcacacttcaaatg
gccagaggaggaattctggcagatgctatgggacttgggaagaccatcatgaccatatcc
ctcctactcactcattcagacaagggtgggttatcaaatagtcaatctgggagtcagctt
tgcactggaggtggttcaagtgataactcagaccaacatccaaatcaattgaacaaggca
acaaaattttcaggcattgataagttgaagcaaacgaagatgcttgtaaacggtggcaat
ctaataatatgtccaatgactcttctgggccagtggaaggcggagttagaaattcatgcc
caacctggttctttgtctgtttatgttcattacggacaaagcagagtgaaggatgcaaat
tttcttgcccagagtaatgttgtaataactacatatggagtgttagcctcagatttttca
gcagagggtgctgtagggaatgggggactgtattcagtccattggtttagagtggttctt
gatgaggcccataccataaaatcctcaaaaagtcaaatttcgatggctgctgctgctctg
gttgctgatcgtcgttggtgtcttactgggactcccattcagaacagcgtggaggacatt
tacagccttcttcggtttttgaaggtggaaccttgggaaaattgggcatggtggaataaa
cttgtccaaaaaccatttgaggagggtgatgagagagggctaaagttggtaaagtccatc
ttaaaacctattatgttaaggagaacaaagaccagtcgagatcgagagggcaggccaatt
ctagttctccctccagctgatgttaaggtgatttactgccaactaacagaagctgaaaaa
gatttctatgaggctttgtttaaaaaatccaaggttaagtttgatcaatttgttgagcaa
gggcgggttcttcataattatgcttctattttggaattacttttacgtcttcgtcaatgc
tgtgatcatccgtttcttgtgatgagtcgaggtgatacgcaagaatattctgatctgaac
aagctagctaaacgtttccttaaaggtgaccaggttgtccttgaaggggaagcaataaat
gtgccttcaagggcatacattaaagaggttgtggaggagctaagtaagggagaccaggga
gagtgtccaatctgtctcgaggcatgtgaagatgcagtattgactccttgtgctcatcga
ttgtgtcgagagtgtctcctggcaagttggcgaaatgctagttccggtttatgtcctgtt
tgtaggaaagccatcacaaggcaagagcttattacggctccgactgacagtagattccag
atagatattgagaaaaattgggttgaatcttccaaaattgtggctctcttgcaagaactt
gaaattcttcgtatgtcaggatctaaaagcattctcttcagtcagtggactgcatttcta
gatcttttacaaatccctctttccaggagtaacatttcatttgttcgtcttgacgggact
ctaaaccagcagcagcgtgaaagagttataaaacagttttcagaagatgacagcatcctg
gtattgctgatgtctctgaaggctggaggggtaggggtaaatttaacagcagcgtccaat
gcctttgttatggatccatggtggaatccagctgtagaggagcaagctgtcatgcgtatt
catcgcattggacaaactaaaagagtgatgatcaggcggttcattgtgaagggaacagtt
gaggaaagaatggaagcagtgcaagctcgcaagcagctaatgatttcaggtgccttgact
gatcaagaagttcgaactgcgcgtattgaagagctgaagatgctgtttacatag

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