Populus alba (white poplar): 118059757
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Entry
118059757 CDS
T07314
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palz03016
]
118059757
Transfer RNA biogenesis [BR:
palz03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
118059757
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
Beta-prop_WDR19_1st
TPR_GEMI5
TPR_IFT80_172
tRNA_Me_trans_M
Motif
Other DBs
NCBI-GeneID:
118059757
NCBI-ProteinID:
XP_034928618
LinkDB
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Position
10:19171370..19176941
Genome browser
AA seq
1324 aa
AA seq
DB search
MKNLKLYREISQNLELQSPQEVLVFSAFDIERNRLFFASSANIIYTAHLSSFQNGKSKGL
LLPSEINQIELEDGDLITAFDYMMEKEALIIGTENGLLLLHNIDDNSTEIVGQVEGGVKC
ISPSPDGDLLAILTGFRQVLVMTHDWDLLYEIAVEEKENYGDGLDVRELDGKNMFGSFIS
WRGDGKYFATISEASESSALLKKIKVWERDSGALHSTSDSKVFMGAVLEWMPSGAKIAAV
YDRKVENRCPDIAFYERNGLVRSSFSIKEAVDATVESLKWNCGSDLVASVVRCEKYDAVK
LWFLSNNHWYLKHEVRYSRQDGVRLMWDPVKPLQLICWTLGGQITIYNFTWISAVTENST
ALVIDDSKILVTPLSLSLMPPPLHLFSLKFPSSVRDLALYSNNSKNRVAAFLSDGSLGAV
ELPDPDTWEDLEEKEFTVEASISETGFGSFVNLAWLDSHILLAVSHYGFSHSNCASHSSM
GEDGLSGFCLQEIELLCSEDHVPSLVTGSGWHAKISHRNYMEGLVIGIAPNPAKNRSAFV
QFDGGNVVEYTSMLGLAVTGGSTKHDDMSFSSSCPWMSVAKASDSGSLKPLLFGLDDIGR
LHFGGKVLCNNCSSFSCYSNLADQVITHLILSTKQDFLFVVEIGDILHGEIELKFENFVH
TGNRRKEENMNFINIWERGAKIIGVLHGDDAAVIIQTTRGNLESIHPRKLVLASIVNALI
QRRFRDALLLVRRHRIDFNVIVDYCGWQTFLQSASEFVKQVNNLSYITEFICSIKNENIM
ETLYKNYISTPCQNRAGDVQAKDVMSFDSSSKVSSLLLAIRKALEVQVTESPARELCILT
TLARSDPPMLEEALKRIKVIREMELLGSSDPRRTSYPSAEEALKHLLWLSDSDAVFEAAL
GLYDLNLAAIVAVNSQRDPKEFLPYLQELERMPSLVMCYNIDLRLHRYEKAFRHIVSAGD
AYYSDCMNLMSKNPQLFPLGLQMITDPAKKMQVLEAWGDHLSDEKCFEDAAITYLCCSSL
ENALKAYRSCGDWSGVLTVAGLLKLEKDELMQLAHDLCEELQALGKPGEAAKIALEYCGD
VNRGINLLISARDWEEALRVAFMHRKEDLVLEVKNAALDCASTLISEHKEGLEKVGKYLT
RYLAVRQRRLLLAAKLQSEERSINDLDDDTVSEASSNFSGMSAYTTGTRKGSAASVTSSV
TSKARDMRRQRKRGKIRPGSPDEELALVEHLKGMSLTAGAKNELRSLLFTLVKLGGEEIA
RKLQLAGENFQLTQMAAVKLAEDTISTDIINEKAHTLEHYIRKMRSELPCLDYFSWRSKV
FISP
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacctgaagctatacagggagatttctcagaatctggaattacaatcgccacaa
gaagttctcgtcttctccgctttcgatatcgaacgcaaccgcctcttcttcgcttcttcg
gccaatatcatttacacagctcacctttcttctttccaaaatggaaaatcaaaaggcttg
ctattaccgtcggagattaatcaaattgaattggaagacggagacttaatcactgcattt
gattacatgatggagaaagaagccttaattattggaactgaaaatggacttttattattg
cataatattgatgataattctactgaaatcgtcggtcaagttgaaggcggggttaagtgt
atctcgccgagtcccgatggagatttgcttgctattcttactggtttcagacaagtgtta
gttatgactcatgattgggatttgttgtatgaaatcgcggttgaggagaaggaaaattac
ggtgatggtcttgacgtacgtgaattggatggaaagaatatgtttgggagttttatttca
tggcgaggtgatgggaaatattttgctacgataagtgaagcgagtgaatcttctgccttg
cttaagaagattaaggtttgggaacgggattcgggtgcattgcattccacatcagattct
aaggtatttatgggggcggttttggaatggatgccaagtggagcgaaaattgctgctgtg
tatgatagaaaagtggagaataggtgtcctgatattgctttctatgagaggaatgggttg
gtgaggagttcttttagtattaaagaagcagttgatgcaacagttgaaagtcttaagtgg
aattgtggttcggatcttgttgcatctgttgttagatgtgagaaatatgatgctgttaag
ctctggtttttgagcaacaaccattggtatttgaaacatgaagttagatactcgagacag
gatggagttaggctcatgtgggatccagtaaagccactacagttgatttgttggactctt
ggaggccagatcacaatttacaacttcacctggatttctgctgtgacagagaactcgaca
gcattggtcattgatgactccaaaatacttgtaactccactttctttatccctgatgcca
cctccccttcatttattcagcctcaaatttccaagttcagtgagggacctggctttatat
tccaataattctaagaatagagtagctgcatttttatcagatggttctttgggtgctgta
gaacttcctgacccagatacatgggaggatcttgaagaaaaagaatttactgttgaagct
tctatttctgagacaggttttggatcctttgtgaaccttgcatggcttgattcacacata
ttacttgctgtttctcattatggcttctctcatagtaattgtgcatcccacagttcaatg
ggtgaggatggacttagtggtttttgtttgcaggaaattgaactattgtgttctgaggac
catgtaccaagtttggtaacaggatcaggctggcatgcaaagatttcccatagaaattat
atggaagggcttgtgattggcattgctcctaatcctgccaagaatcgttcagcttttgtt
cagtttgatggtggaaatgttgttgagtacacttcaatgctgggcttggctgttactgga
ggttcaacaaaacatgatgatatgagcttttcatcctcttgcccttggatgagtgtggct
aaggccagtgacagtgggtcattaaagcccttgctttttggtcttgatgacattgggagg
ctgcattttggtgggaaagttctatgcaacaactgcagtagtttctcatgctactcaaat
ttggctgaccaagtaatcactcatttgatactttcaaccaaacaagactttctctttgtt
gtggaaatcggtgatatactgcatggagaaatagagttaaaattcgagaactttgtccac
accggtaacagaagaaaagaagaaaatatgaacttcataaatatttgggaaagaggtgcc
aaaattattggtgtcctgcatggtgatgatgctgctgttattatacagacaactcgggga
aatctggaaagcattcaccctagaaagctggttcttgcttcaattgtcaatgctttgatc
caaaggcgttttagggatgcactgctgttggtcagacggcatagaatagatttcaatgtt
atcgttgactattgtggatggcaaacttttcttcagtcagcttcagaatttgtcaaacag
gttaacaatttgagctatataaccgagttcatttgttccataaagaatgaaaacattatg
gaaaccctatacaaaaattatatctctacaccctgccaaaacagagctggagatgttcaa
gctaaggatgtcatgagctttgatagttccagcaaggtttcttctctcctcctggcaata
aggaaggctcttgaggtacaagtcaccgaaagccctgcaagggagctttgcattctaacc
actctagctcgcagtgatcctcctatgctcgaagaagctttgaaaagaatcaaagttatt
cgtgaaatggaattattaggttcaagtgaccctaggagaacctcttatccatctgctgaa
gaagctctgaagcatctgttgtggttatctgattccgatgctgtatttgaagctgcctta
ggactttatgatttgaaccttgcagctattgtggcagtgaactctcaaagagacccaaag
gaatttcttccttatctacaagaattagaacgcatgccaagccttgtaatgtgctacaat
attgaccttcggttacaccgatacgagaaggctttcagacacattgtttctgctggtgat
gcatattattcagattgtatgaacctcatgagcaaaaatcctcaattatttcctctgggc
cttcaaatgatcactgatcctgcaaagaaaatgcaggtccttgaggcctggggcgatcat
cttagtgatgaaaaatgctttgaggatgccgcgataacttatctgtgttgttccagtttg
gaaaatgccttgaaggcatatcgctcttgtggtgattggagtggggtgcttactgttgct
gggctccttaaactggaaaaggacgagttaatgcaacttgctcatgatctttgtgaagag
ctccaagcacttggtaaaccaggagaagctgccaaaattgctctggagtattgtggagat
gttaacagagggattaatttattaattagtgcaagggactgggaggaggctttgagggtt
gctttcatgcataggaaagaggatctggtattggaagtgaagaatgcagctttagattgt
gcaagcacactaatcagtgaacacaaggaaggcttggagaaggtagggaagtacttgact
cgctatttagctgttcgacagagaagattacttctggcagcaaagcttcagtcagaggaa
cggtcaataaatgatctggatgatgatactgtttcagaagctagcagtaacttcagtggc
atgagtgcctacaccacaggaacaaggaagggctctgctgcttctgtaacctccagtgtc
actagcaaggcaagagacatgaggcgtcagcggaagagaggaaaaattcgccctggcagc
cctgatgaggagttagcactggtagagcatttgaaaggcatgtctctaacagctggagca
aagaatgagcttagatctttattgtttacccttgtgaagcttggtggtgaagaaatagca
agaaagctacaattggctggagagaattttcaacttactcagatggcagcagtcaaacta
gcagaagatacaatttctactgatatcataaatgagaaggcacacactttggagcattac
attcggaaaatgagaagtgaactgccatgtttggattatttttcttggcgatctaaagtt
ttcatttctccttaa
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