Populus alba (white poplar): 118059947
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Entry
118059947 CDS
T07314
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
palz
Populus alba (white poplar)
Pathway
palz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118059947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118059947
03016 Transfer RNA biogenesis [BR:
palz03016
]
118059947
03012 Translation factors [BR:
palz03012
]
118059947
04131 Membrane trafficking [BR:
palz04131
]
118059947
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
palz04147
]
118059947
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
118059947
Transfer RNA biogenesis [BR:
palz03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
118059947
Translation factors [BR:
palz03012
]
Eukaryotic type
Elongation factors
118059947
Membrane trafficking [BR:
palz04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
118059947
Exosome [BR:
palz04147
]
Exosomal proteins
Proteins found in most exosomes
118059947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
AAA_22
FlpD
Motif
Other DBs
NCBI-GeneID:
118059947
NCBI-ProteinID:
XP_034928883
LinkDB
All DBs
Position
10:19844880..19847564
Genome browser
AA seq
449 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQIQEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLSTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAREAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSAYPPLGRFAVRDMRQT
VAVGVIKNVEKKDPSGAKVTKSAAKKGAK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagagaagactcacatcaacattgtggtcattggccatgttgactctggaaag
tcgaccaccactggccacttgatttacaagcttggaggtattgacaagcgtgtcattgag
aggttcgagaaggaagctgctgagatgaacaagaggtcattcaagtatgcctgggtgctc
gacaagctcaaggctgagcgcgagcgtggaattaccattgatattgccttgtggaagttt
gagaccaccaggtactactgcactgtcattgatgccccaggacatcgtgactttatcaag
aacatgattactggaacttcccaggctgactgtgctgtgcttatcattgattccaccact
ggtggttttgaagctggtatctctaaggatggccagacccgtgagcacgcactacttgcc
ttcacccttggtgtgaagcaaatgatctgctgctgtaacaagatggacgccaccactcca
aagtactccaaggcaaggtatgatgaaattgtcaaggaggtgtcatcctacttgaagaag
gtcggttacaaccctgacaagattcccttcgtccctatctctggatttgagggtgacaac
atgattgagaggtcgaccaaccttgactggtacaagggtccaactctcctggatgccctc
gaccagatccaggagcccaagaggccctcagacaagcccctccgtctcccacttcaggac
gtgtacaagattggtggtatcggaactgtcccagtgggtcgtgttgaaactggtgtcctc
aagcccggcatggttgtcacttttggtccaactggactgagcactgaagtcaagtctgtt
gagatgcaccacgaggctctccaagaggctcttcccggtgacaatgtggggttcaacgtc
aagaatgtcgctgttaaggatctgaagcgtggttttgttgcctcgaactccaaggacgat
cctgccagggaggctgccaacttcaccgcccaagttatcatcatgaaccatcctgggcag
atcggaaacggttacgcccctgtccttgactgccacacctctcacattgctgtgaagttt
gctgagatcctcaccaagatcgacaggcggtctggtaaggaactggagaaggagcccaag
ttcctgaagaacggcgatgctggtatgattaagatgattcccaccaagcccatggtggtg
gagactttctcagcgtatcctccactcggtcgttttgctgtgagggacatgcgccagacc
gttgctgtgggagttatcaagaacgtggagaagaaggatccctctggtgctaaggtgacc
aaatctgctgccaagaagggtgccaagtga
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