Populus alba (white poplar): 118060144
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Entry
118060144 CDS
T07314
Name
(RefSeq) uncharacterized protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
palz
Populus alba (white poplar)
Pathway
palz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118060144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palz03021
]
118060144
03019 Messenger RNA biogenesis [BR:
palz03019
]
118060144
Transcription machinery [BR:
palz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118060144
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
118060144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
PI-PLC-C1
Gln-synt_C-ter
Motif
Other DBs
NCBI-GeneID:
118060144
NCBI-ProteinID:
XP_034929192
LinkDB
All DBs
Position
10:21475231..21479687
Genome browser
AA seq
661 aa
AA seq
DB search
MEPFFNSRRPRHHKQKGNTAPYNHQGFSANPSLTNSMQPQLGLTNPQIPIPFNNSNTPLR
NGQAMPNMPPLINQQHGLVSGPNDLAILQLQNQVNKLNALKMLMNQVNQLQGELFGPGFS
NLPQQINQNMGLLQNPMQNMMNPVMPMQMPMTSQVGSFNVPSSSHQVVGAQSPNFFVNQQ
VKPNQPNFVMPTTGANGSKQLSFENQQMQGNLSATQKNQNFVMPAVGTNGSNPLHVATQQ
VEGISPASQQSEKFVMPTMAANGPKPLPAATQQVQGNPFTSQQSQNLQPSAYNRWQGNPA
KNGQGSTPNSKQGIFSGKNFKNNPKREQSQSGYQKSEFHRMDNGKRKLGFSNKHGGKGKG
NERAAKFGRTDPSNQVSEQKRTHIYTEQEIKQWRESRRKHFPTKTNIEKKQTEKLIDSGV
IDKEANFRRKQLKEILAKQAELGVEVAEIPPEYMLDSEKLGVEVAETPLSYLLDSEKLGV
EAAEIPPHHLLDSEKQEHGREDNRRSLTKKGRFWNKHDRRGRYKRKGRSDMQLGLENGDR
KPTLLEKLLCADIKRDKHRLLQVFRFMVANSFFKDWSDKPLKFPSVVVKEDGCKDEPQEG
KPSLVGEEESEVPNNTTVEDFGDRDDGDEHDAQVEPGNGSVMGNCDIVDEVHRVEEGEII
D
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaacctttcttcaattcccgtcgtcctagacaccacaaacaaaagggaaacactgct
ccttataatcaccagggattttcagcaaatccttctttaacaaattcaatgcaacctcag
ctgggtttaaccaatcctcaaatcccaattccttttaataattcaaatacccctttaaga
aatggacaagccatgcctaatatgccacctttaatcaatcaacagcatggtttagtgagt
ggacctaatgatctggctatccttcagttacaaaatcaggtcaacaagttgaatgcttta
aagatgttgatgaatcaagtaaatcaattgcaaggagagctgtttggtcctggtttctcc
aatttgcctcaacaaatcaatcaaaatatgggtttgttgcaaaatccaatgcagaatatg
atgaaccctgttatgcctatgcaaatgccaatgacttctcaagttggttcctttaatgtc
ccttccagtagtcaccaagtggtaggtgctcaaagtccgaacttttttgtaaatcaacaa
gttaagccgaaccaaccaaactttgtaatgccgacaactggtgcaaatggatcgaaacaa
ctgtcttttgaaaatcagcaaatgcaagggaacttgtctgcaacacagaaaaatcagaac
tttgtaatgcctgcggtgggtacaaatgggtcgaatccattgcatgttgcaactcagcaa
gtggaagggatctcgccggcatcacaacaaagtgagaaatttgtaatgcctacaatggct
gcaaatggaccaaagcctttgccagctgcaactcagcaagtgcaagggaacccatttaca
tctcagcaaagtcagaacttgcaaccctctgcttacaataggtggcagggcaatcctgct
aaaaatggccagggtagtactccaaattccaaacaaggaatcttttctggaaaaaacttc
aaaaataatccaaagagagagcaatcacaatcaggatatcagaaatccgagttccatcgc
atggataatggaaagagaaagcttgggttttctaataaacacggtggaaaagggaaaggc
aatgagagggcagcaaaatttggtcgcactgatccttcaaaccaagtttcggaacagaaa
agaactcatatatacacggaacaagaaatcaaacaatggcgtgaatcacgtaggaagcac
ttcccaacaaaaaccaacatagagaagaagcagactgaaaagctaatagactctggggtc
attgataaagaggccaactttcgtcgcaagcaactcaaggagattttggcaaagcaggct
gagctaggagttgaagttgctgaaataccaccagaatacatgttagattcggagaagtta
ggagttgaagttgcagaaacaccactgagctatctgttggattcagagaagctaggagtt
gaagctgcagaaataccaccgcaccatctgttagattcagagaaacaagagcatggaagg
gaagataacagaaggtccttgactaagaaggggagattctggaacaagcatgatagaaga
ggaagatataagagaaaaggtcggtcagacatgcagcttggattagaaaacggggatagg
aagccaacgctgttggagaagcttctttgtgcagatataaagagggataagcaccggttg
ttgcaggtttttaggttcatggtggcgaactctttcttcaaggattggtcagataagcct
ttgaagtttccttcggtagtggttaaagaagatgggtgcaaggatgagccacaggaagga
aaaccttcacttgttggggaagaggagtctgaagttccgaacaatacaacagttgaagat
tttggtgatagagatgatggtgacgaacatgatgctcaagtggagccagggaatggttct
gtcatgggaaattgtgatattgttgacgaagttcatagggttgaagaaggagaaatcatt
gactaa
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