Populus alba (white poplar): 118060277
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Entry
118060277 CDS
T07314
Name
(RefSeq) probable pectate lyase 18 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118060277
Enzymes [BR:
palz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
118060277
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
SpGH101_helical
Motif
Other DBs
NCBI-GeneID:
118060277
NCBI-ProteinID:
XP_034929359
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Position
8:1832153..1837341
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AA seq
500 aa
AA seq
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MKLSNVCILLICHFASFIPFIIETTAFNLTLPHQHPDPEAVAEDVKRRVNASLSRRNLLS
IQEKDQCQTGNPIDDCWRCDPNWASNRQRLADCSIGFGQGSLGGRGGQIYVVTDSSDHNP
ANPTPGTLRYAVIQDQPLWIIFSSDMVIKLKHELIFNSYKTIDGRGANVHVTGNGCITLQ
YVTHIIIHNIHVHHCKPSGNTNIASSPTHVGRRGESDGDGISISGSQKIWIDHCSLSYCT
DGLIDAILGSTAITISNSHFTHHNEVMLLGHNDKYLLDSGMQVTIAFNHFGVGLVQRMPR
CRRGYIHVVNNDFTAWEMYAIGGSANPTINSQGNRYTAPADDNAKEVTKRVDTNEVEWAD
WNWRTDEDILVNGAFFVPSGAGLSAQYSKASSVEPRSARLITELTMNAGVFGDPRDDSGG
ISNPGFSGAGTSTVTPTTGTQGTGASGGDGDYFGMIFGSGSSLPRPPTSISLIFLSLLII
IALSTITNNGALLSFPLLSL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttctaatgtctgcattctcctaatttgccactttgcttcattcattcctttc
attattgaaactactgccttcaatctcacccttccacatcaacatccagaccctgaggct
gttgctgaagatgtaaaacggagagtcaatgcatctctatcaagaagaaaccttttgtcc
attcaagaaaaggaccaatgccaaaccggaaaccccatcgacgattgctggagatgcgat
cccaattgggctagcaaccgccaacgtttggctgactgctccattgggtttggtcagggc
tcattaggcggtagaggtggccagatctatgtggtcactgattcctcggaccataaccca
gccaaccccacaccaggcaccttacgttatgctgttatccaagaccaacctctttggatc
atcttttcttcggacatggtcattaagctcaaacatgaacttattttcaacagttacaaa
actattgatggccgtggcgcaaatgtgcacgttacaggaaatgggtgcataacacttcaa
tatgtgacacatattattatccacaacatccacgttcaccattgcaagccttctggtaac
actaatatagcatcatcaccgacacatgttggacggagaggggaatcggatggtgatggt
atttccatctctgggtcccagaagatttggattgatcattgctcattatcgtattgtact
gatggtttgattgatgctatactggggtctactgcgattaccatatcaaacagccatttt
acgcaccataatgaagtgatgctattggggcacaatgataagtatttattggactcagga
atgcaagttactatagcttttaatcacttcggggtagggctggtccagcgaatgccaagg
tgtagaagagggtatatacatgtggtgaacaatgattttacagcttgggagatgtatgct
atcggtggtagtgcaaaccctaccataaatagtcaagggaatcgatataccgcaccagcc
gatgataatgccaaagaggtaacaaagagggtggacacaaacgaggtagagtgggcagat
tggaattggagaacagacgaggacatcttggtaaatggagccttctttgtgccctcagga
gctggtttgagtgcgcaatatagcaaagcctccagcgtggaacccaggtctgctaggtta
attacagaactcaccatgaatgctggtgtctttggtgaccccagagatgatagcgggggc
atttctaatcctggattcagcggtgctgggaccagtactgtcacgcccaccaccggcact
caagggacgggggccagtggcggtgatggcgactactttggaatgatattcggcagcggc
tcttcactaccccgacctcccacttctattagcttaatctttttgtctcttctaattatt
atagctttgagcaccatcaccaacaatggtgccttgttatctttccccttattatcatta
tag
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