Populus alba (white poplar): 118061243
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Entry
118061243 CDS
T07314
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
palz
Populus alba (white poplar)
Pathway
palz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118061243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118061243
03110 Chaperones and folding catalysts [BR:
palz03110
]
118061243
03029 Mitochondrial biogenesis [BR:
palz03029
]
118061243
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
palz04147
]
118061243
Enzymes [BR:
palz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
118061243
Messenger RNA biogenesis [BR:
palz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
118061243
Chaperones and folding catalysts [BR:
palz03110
]
Heat shock proteins
HSP60 / Chaperonin
118061243
Mitochondrial biogenesis [BR:
palz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
118061243
Exosome [BR:
palz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118061243
Exosomal proteins of other body fluids (saliva and urine)
118061243
Exosomal proteins of breast cancer cells
118061243
Exosomal proteins of colorectal cancer cells
118061243
Exosomal proteins of bladder cancer cells
118061243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CO_dh
Motif
Other DBs
NCBI-GeneID:
118061243
NCBI-ProteinID:
XP_034930559
LinkDB
All DBs
Position
1:complement(5270964..5275792)
Genome browser
AA seq
574 aa
AA seq
DB search
MHRFTSSLASKARIARSSTNQIGSRLSWSRNYAAKDIRFGVEARAGMLKGVEELADAVKV
TMGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDTAGDGT
TCATVLTQAIFTEGCKSVAAGMNAMDLRRGISMAVESVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIQDGKTLSNELEVVEGMKLDRGYISPYFITDQK
TQKCELDDPLILIHDKKVSSLHAVVKVLELALKRQRPLLIVAEDVESEALATLILNKLRA
GIKVCSIKAPGFGENRKAILQDLAALTGGEVITEELGLNLENVDLDMLGSCKKVTVSKDD
TVILDGAGDKKSIEDRCEQIRSAIDSSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
SEKKDRVTDALNATKAAVEEGIVPGGGAALLYASKELDKLQTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAA
SVSSLMTTTEAVVTDLPKDVKDAPAMGPGMGMDY
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcttcacctcgagcctcgcttctaaagctcggattgctaggagcagcaccaat
cagattggaagtaggttgagttggagcagaaactatgctgccaaagacataagattcggt
gtggaggctcgtgctgggatgctcaagggtgttgaagagctagctgatgctgtcaaagtc
accatgggccctaagggtcgcaatgtggttattgaacaaagctttggtgcccctaaagtg
acaaaagatggtgtgactgttgctaaaagcattgaattcaaggataaagtcaagaatgtt
ggtgctagcctggtgaagcaggttgcaaatgccaccaatgacactgcaggcgatgggacc
acttgtgctacggttctcactcaagcaatatttactgaaggatgcaaatcagttgcagct
ggaatgaatgcaatggacctaagacgtggtatcagcatggcagttgaatcagttgttacc
aatttgaagagcagagcaagaatgatcagcacatccgaagaaattgcacaagttggtaca
atatcagcaaatggggagagggaaattggtgaattgatagcaaaggccatggagaaggtt
ggcaaagagggagttataacaattcaagatgggaaaacattatctaatgagttggaagtt
gtcgaggggatgaagcttgacaggggctatatatccccttatttcatcacggaccagaaa
acccaaaaatgtgaattagatgaccctctcattctgatccatgacaagaaagtctcaagt
ttgcatgctgtggtgaaagtactagagttagctttaaagagacaaaggcccttgctgatt
gttgctgaagatgtggaaagcgaggccttggcaactcttattttaaataagcttcgtgct
ggaatcaaggtctgttccattaaggcccctggttttggagagaacaggaaggccatattg
caggatctggctgcactcacaggaggcgaggttataactgaagagcttggcctcaacctt
gaaaatgtggatttggatatgcttggcagttgcaaaaaggttacagtatcaaaggatgac
acagttattcttgatggtgctggcgataagaagtccattgaggatagatgtgaacagatc
cgatctgcgatagattcaagcacttctgactatgacaaagagaagttgcaagaaagattg
gcgaagctttctggtggtgttgctgtgctgaagattggaggagctagtgaagctgaagtc
agtgagaagaaagatagagttacagatgccctaaatgccacaaaggctgctgtagaagag
ggtattgtgccaggtggtggtgctgctcttctttatgcatcaaaagagttggataagctt
caaactgcaaactttgaccagaagattggtgttcaaattatccagaatgccctgaagact
cctgtgcatacaattgctagtaatgcgggagttgagggagctgttgttgttggtaagcta
ttggagcaggacaaccctgatctagggtatgatgctgccaaaggtgaatatgttgatatg
gtgaaagctggaattattgacccactgaaagtaattagaactgctttggtcgatgctgcc
agtgtctcgtcgctgatgacaacaactgaggctgttgtaactgatcttccaaaggatgta
aaggatgctccagcaatgggcccaggcatgggcatggattattga
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