Populus alba (white poplar): 118061583
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Entry
118061583 CDS
T07314
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118061583
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
palz01007
]
118061583
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palz03016
]
118061583
Enzymes [BR:
palz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
118061583
Amino acid related enzymes [BR:
palz01007
]
Aminoacyl-tRNA synthetase
Class II (A)
118061583
Transfer RNA biogenesis [BR:
palz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
118061583
Prokaryotic type
118061583
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
tRNA-synt_2
tRNA-synt_2b
Lyase_aromatic
Motif
Other DBs
NCBI-GeneID:
118061583
NCBI-ProteinID:
XP_034930969
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Position
10:complement(10235133..10243850)
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AA seq
885 aa
AA seq
DB search
MAACRDELKIITIGGKGSALTSTSVYTIATGHALVRIDSSALDRLTNQNRNPQKPLHSIS
LTPNKASNLIATRAYLTVLLNKLLHYTNSSNVRTFLPNLIAETLNSNKFGSEAQGLDVEV
TEEEKLVIEVSNAELYGVCAILDHEGMGLGVVDDAVAALSCEAVKADVRSFDGVDSGDGF
VDKEAATVASDMKVLLVGYDSNKRGESEAVSEIPKVNGRLREVVKALHTMVRVELNSGVK
GSSGGSGKAVGTTVSGLAVALLFLGKSSLCRVKMNLDVMGNEVLSSGLVSLYEKKCPSRD
DLMKGYKAVTDLLVEEDYVMFGYGVCGLLGIVWKIVAWEEITAFFALEGAELMSGIGGQV
YGGEAKVDKKSEKKKKKKTVLGKGTSVIVQLIKDRLQIVGGGSGDSLDIIEKWVENLFSF
FSPKQPEFDEFVQKVKEIVERNESRRLPKLPKGTRDFANEQMVIRERAFSIIADVFKRHG
ATSLDTPAFELRETLMGKYGEDSKLIYDLADQGGELCSLRYDLTVPFARYVAMNGITSFK
RYQIAKVYRRDNPSKGRYREFYQCDFDIAGQYEEMGPDFEIVKVLTELLDELDIGDYEVK
LNHRKLLDGMLEICGVPPEKFRTICSSIDKLDKQSFEQVKKEMVEEKGLAVETADRIGTF
VKEKDSPKELLSKLKQEGSEFLQNASSSRALDELEILFDALERSKCIDKVVFDLSLARGL
DYYTGVIFEAVFKGTTQVGSIAAGGRYDNLIGMFGSKPVPAVGVSLGIERVFAIMEQLQK
DRNETTRPTETQVLLGVMGNKSKIPLAAELTSKLWSAKLKAEFVVSTRFDKIISRANDSK
IPWMVLVRDRELETGKVKIKNLETKIEEEVPLSAFVDEVKNRLNL
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatgtagagatgagctaaaaataatcaccattggaggcaaaggctctgcttta
acctccacttccgtctacaccatcgccacaggccacgctctggtacgcattgactcatct
gcactcgatagactcactaatcaaaacagaaaccctcagaaaccactccattcgatctct
ctaacccccaacaaagcctcgaacctaattgcaactcgcgcttaccttactgtcctcctc
aataagctccttcactacacgaattcctctaatgtacgtacgtttctccctaatttgatc
gcagaaaccctaaattcgaataaatttggaagtgaagcccaagggttggatgttgaggtg
actgaggaggagaaacttgtcattgaggtatccaatgcggaattgtatggggtttgtgcg
attttggatcatgaagggatggggttaggtgttgttgatgatgctgttgctgcgttgtcg
tgtgaggcggtgaaagcagatgtcaggtcgtttgacggtgtggatagtggtgatgggttt
gttgataaggaggcagctacggttgcgagtgatatgaaggttttgcttgttgggtatgat
tcgaataagagaggagagagtgaggcggtttcggaaattccgaaagttaatgggaggttg
agggaggtggtgaaggcgttgcatacaatggttcgagttgagttgaattccggggtgaaa
ggatcgagcggtgggtctggaaaggcagtggggaccacggtgtcagggttggcagtggcg
ttgctgtttttggggaagagtagtttgtgtcgggttaaaatgaatttggatgtgatgggg
aatgaggttttgagtagcgggttggtgagtttgtatgagaagaaatgtcctagcagggat
gatttgatgaagggatacaaggcagttactgatttgcttgtcgaggaggattatgtaatg
tttgggtatggggtgtgtggtttgttggggattgtatggaagattgttgcgtgggaggag
ataactgcgttttttgctcttgagggtgctgagttgatgagtggaattggtggtcaagta
tatggaggggaggcaaaagtcgacaagaaaagtgagaagaagaagaaaaagaagactgtt
ttagggaaagggactagcgtgattgtgcagttaattaaagataggttgcagattgttgga
gggggttctggtgatagtttggacataatagagaaatgggttgagaatcttttttccttt
tttagcccaaagcaaccagagtttgatgaatttgtgcagaaagtgaaggagattgttgaa
agaaatgaaagtagaagacttcctaagcttccgaagggtactcgtgattttgcaaatgaa
caaatggtgataagagaaagagcattttcaatcatagcagatgttttcaagaggcatggt
gccacttcccttgacactcctgcttttgaattgagagagactctcatgggaaaatacggg
gaggattcaaaattaatatatgatcttgctgaccagggtggagagctttgttctctgcgg
tatgacttgactgttccatttgctagatatgtggctatgaatggtatcacttcatttaaa
aggtatcaaatagctaaggtatacagaagagataacccatctaaaggaagataccgagaa
ttttatcagtgtgactttgatattgctggtcaatatgaagaaatgggaccagactttgag
atagtgaaggttttgacagaattgcttgatgagctagatattggagattatgaggttaaa
ttaaaccatcggaagttgttggatggtatgttggaaatatgtggagtgcctcctgaaaaa
ttccgaaccatttgttcaagtattgacaaactggacaagcaatcatttgagcaggttaag
aaagaaatggtggaagagaaggggttagctgttgagacagctgacagaattggtactttt
gtgaaggaaaaggattctcctaaggaattattatcaaagcttaaacaggaaggcagtgag
tttttacaaaacgcttcttctagtcgtgcactggatgagttggaaattttgtttgatgct
cttgaaagatcaaagtgcattgacaaagtggtttttgatttaagccttgccagagggctt
gattattataccggagtcatttttgaagctgtttttaaagggactacacaggtcggttca
attgctgctggggggcgatatgacaaccttataggaatgtttggttcaaaaccagttcca
gctgttggggttagtcttggcatcgagcgagtatttgctataatggagcagctgcagaag
gaccggaatgagacaacccggcctactgaaacccaggttctgctgggcgttatgggaaac
aaaagtaaaatacctctagctgcagagctgaccagtaagctgtggagcgccaagctgaaa
gctgaatttgttgtcagtacaagatttgataagatcattagccgcgctaatgattcaaaa
atcccatggatggtactcgtcagggatagggagctggagacagggaaggtaaaaataaag
aaccttgagaccaagatagaggaagaggtacctttaagtgctttcgttgatgaagtcaag
aatcgattgaacttgtga
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