Populus alba (white poplar): 118061629
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Entry
118061629 CDS
T07314
Name
(RefSeq) histone acetyltransferase GCN5 isoform X1
KO
K06062
histone acetyltransferase [EC:
2.3.1.48
]
Organism
palz
Populus alba (white poplar)
Pathway
palz03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118061629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palz03021
]
118061629
03036 Chromosome and associated proteins [BR:
palz03036
]
118061629
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
118061629
Transcription machinery [BR:
palz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
118061629
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
118061629
HAT complexes
PCAF complex
118061629
STAGA complex
118061629
TFTC complex
118061629
SAGA complex
118061629
SLIK complex
118061629
ADA-HAT complex
118061629
HAT-A2 complex
118061629
ATAC complex
118061629
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Motif
Other DBs
NCBI-GeneID:
118061629
NCBI-ProteinID:
XP_034931019
LinkDB
All DBs
Position
5:20415593..20422679
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AA seq
560 aa
AA seq
DB search
MDTHSHLTAPNRSRSSQSPSPSHSASASVSASATSSIHKRKLAAAAAAYDDHLPPFAPSS
LSADTRDGALTSNDDLESISARGADSDSDDAEDSETVLDDEEEDFDNDSSMRTFTTARLE
TTNAAGSSSRNTKIKMENTNVKIENSDSGKDGGNIETGAVGPAAAGSSGPGILVKEDSVK
IFTENLQASGAYSAREESLKREEEAGKLKFVCYSNDDVDEHMVWLIGLKNIFARQLPNMP
KEYIVRLVMDRSHKSVMIIRRNQVVGGITYRPYVSQRFGEIAFCAITADEQVKGYGTRLM
NHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTKEIYLEKDRWQGYIKDYDGGILMECK
IDQKLPYTDLSTMIRRQRQAIDEKIRELSNCHIIYPGIDFLKKEAGIPKKIIKVEDIPGL
REAGWTSDQWGHSRFRTLNSATDSATNQKHLTAFMRSLLKSMHDHVDAWPFKEPVDARDV
PDYYDIIKDPMDLKTMSKRVESEQYYVTLEMFIADVKRMCANARTYNSPDTIYYKCATRL
EAHFQSKVQSGIQSGTKILP
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggacactcactctcacttaactgcacctaatcgctctcgcagctctcaatctccgtct
ccttcgcactcggcctcggcctcggtctccgcctctgcaacctcttccatccacaaacgg
aaactcgctgcggctgcggcggcgtacgacgaccacttgccaccatttgctccgtcttct
ctctccgcagacactcgcgacggcgctctcacctccaacgacgaccttgagagcatctcc
gctcgcggcgccgactctgactccgatgacgctgaagattccgaaaccgtcctcgacgat
gaagaggaagactttgacaacgattcctccatgagaacgttcaccacagcccgcctcgag
accactaacgccgctggcagcagcagccggaacacgaagatcaaaatggagaacacgaat
gtcaagattgagaattctgatagcgggaaggacggtgggaacatagagactggtgcagtg
gggcctgctgctgcggggagttctgggccagggattctggtgaaggaggattctgttaaa
atatttacggaaaatttgcaggctagtggagcttatagcgcgagagaagagagtttgaag
agagaggaggaagcaggaaaactcaagtttgtctgttattcaaatgatgatgttgatgag
catatggtttggctgataggattgaagaatatatttgcgaggcaattgcccaacatgccc
aaggagtacatagttcgacttgtgatggatagaagccacaaatctgtgatgattattaga
cgcaatcaggtggttggtggtatcacttatcgtccatatgtcagtcagaggtttggggag
atagctttttgtgcaatcaccgcagatgaacaagtaaaaggttatggcacaagattgatg
aatcacttaaagcagcatgcacgtgatgttgatgggttaacacattttctgacgtatgct
gacaataatgctgttggttattttatcaagcagggtttcacaaaagaaatttacttggag
aaagatcgatggcaagggtatattaaagactatgatggaggtatcttaatggaatgcaag
attgatcaaaaacttccttacactgacttatcaaccatgattcgtcgtcagagacaggca
attgatgaaaagataagagagctatccaattgtcatataatctatcctggaattgatttt
ctaaagaaagaagctggtattcccaagaaaatcatcaaagtcgaggatattcctggcttg
agggaggctggctggacttctgatcaatggggccattcacgtttcagaacattaaactct
gctacggatagtgccacaaatcaaaaacatttgactgcatttatgcgctcacttttaaag
tcaatgcatgaccatgtggatgcttggccatttaaggaaccagttgatgctcgtgatgtc
cctgattattatgacatcatcaaggatcccatggatctgaagacgatgtcaaaacgggta
gagtcagaacaatactatgtaacacttgagatgttcattgctgatgttaagaggatgtgt
gccaatgcacggacatacaactcacctgataccatttattataagtgtgcaaccaggctg
gaagcccattttcaaagcaaagttcagtcaggcatccaatctggtacaaaaattctgcca
tga
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