Populus alba (white poplar): 118061813
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Entry
118061813 CDS
T07314
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3
KO
K14948
polypyrimidine tract-binding protein 2
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
palz03041
]
118061813
Spliceosome [BR:
palz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118061813
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
DUF1797
TGF_beta
DUF7787
Motif
Other DBs
NCBI-GeneID:
118061813
NCBI-ProteinID:
XP_034931283
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All DBs
Position
5:18648720..18655089
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AA seq
435 aa
AA seq
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MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAINALQY
YTDVQPTIRGRNVYVQFSSHQELTTMDQNTQGRGEEPNRILLITIHHMQYPITVDVLHQV
FSPHGFVEKMVTFQKSAGFQALIQYQSRQSAVQARTSLQGRNIYDGCCQLDIQFSNLDEL
QVNYNNDSSRDFTNPNLPSEQRARSSQPSYGDAVGYPQMPNAAAIAAAFGGGLPPGISGT
NDRCTILVSNLNPDRIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHF
LKGAMLFGKRLEVNFSKHPNITQGADTHEYMHSNLNRFNRNAAKNYRYCCSPTKMIHLST
LPQVITEDEIVSLVEEHGTVVNTKLFEMNGKKQALVLFETEEEATEALVCKHATSLAGSI
VRISFSQLQSIRENQ
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgactgagccttccaaagttatccatgttcgcaacgtggggcatgagatttctgaaaat
gacttgcttcagctgttccagccattcggggttataacgaagcttgttatgcttcgtgct
aaaaatcaggctctccttcaaatgcaagatgttccttcagccatcaatgctcttcaatac
tatacagatgttcagccaactataaggggaaggaatgtttatgttcaattctcatcgcat
caagaactgactacaatggatcaaaatactcaagggcgaggagaagagccaaatcgaatt
ctgttaattaccatccatcacatgcaatatcctattacagtggacgtgctgcatcaagtt
ttttccccccatggatttgtggagaagatggtcacatttcagaagtcagctggtttccaa
gcccttattcaataccagtcacgccagagtgctgttcaggctaggacttctcttcaggga
cgcaatatctatgatggctgctgtcagctggacattcagttttcaaacctggatgagttg
caagtgaactacaacaatgacagctcaagggatttcactaatcctaacctgccttcagaa
cagagagccagatcttcccaaccatcatatggcgatgcagttggatatcctcagatgccc
aatgcagctgcaattgctgctgcctttggtggaggtttgcctcctggaattagtgggaca
aatgataggtgcacaattcttgtctccaatttaaaccctgatagaatagacgaggataag
cttttcaacctgttttctctctatggaaacatagtgcggattaagcttcttcgcaacaag
cctgatcatgcacttgttcagatgggggatggtttccaagctgaattggcagtacatttt
ctgaagggtgccatgctttttggaaagcgattggaggtcaacttttcaaagcatccaaac
ataactcaaggtgctgatacgcacgagtacatgcactctaatctgaatcgcttcaaccgt
aatgctgcgaagaactaccgatactgctgttcaccaacaaagatgattcatctttccact
ttacctcaggtcatcactgaggatgagattgtgagtcttgtagaggaacatggcaccgtt
gtgaacaccaagctctttgagatgaatggtaagaagcaggcgcttgttctgtttgaaacc
gaggaggaggccacggaagccctcgtgtgcaagcatgctacttcacttgctgggtcaatt
gtccgaatctcattctcccagctacagtccattagagaaaaccaataa
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