Populus alba (white poplar): 118061968
Help
Entry
118061968 CDS
T07314
Name
(RefSeq) uncharacterized protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palz03016
]
118061968
Enzymes [BR:
palz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
118061968
Transfer RNA biogenesis [BR:
palz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
118061968
Prokaryotic type
118061968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
118061968
NCBI-ProteinID:
XP_034931510
LinkDB
All DBs
Position
5:complement(22417763..22419725)
Genome browser
AA seq
538 aa
AA seq
DB search
METPDSKTKASPPQQQEPDLKRPKMSTATSEDEDAAATTPGDDTTIKKQRYKRRKIAIFL
TYCGVGYQGMQKNPGAKTIEGDLEEALFHAGAVPEHDRGIPKRYDWARSARTDKGVSAVG
QVVSGRFYIDPPGLVERLHSNLSPQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALDP
CAHRDRESVLASLGSGSELVKCLQCSERGRKVVGAVGKRSFESKSDVSPTEIWSNDKDTT
VKSEIKEEVSGLMDNGDGDIRNSESVNETKVFKNEDDGKKSETTESGISSNSEDANANPE
IKDEIMVSIGNGDDKNTTSEEEAIKGSGFCYGEKEKERFNRILNYYVGSHNFHNFTTRTK
AEDPSAQRYIISFDAKTTFTVEGIEFVKCEVVGQSFMLHQIRKMIGVAVAIMRNCACESL
IQTALQKHVNINVPTAPEVGLYLDECFFTSYNQKWKDSHEELSMKDYEEEANEFKMKHIY
SHIATTEHKEGSVALWLHSLNYRNYPDLRLCDNGDNITCEDNNGRESTMVENMTECTT
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccctgattcaaaaaccaaagcatcaccaccacagcaacaagaaccagacctc
aaaaggcccaagatgtccactgcaacctccgaggacgaagacgccgccgccacaaccccc
ggtgacgacacaaccattaaaaagcaaagatacaagcgccgcaaaatcgcaatattcctc
acatactgcggcgtcggctatcaaggtatgcagaagaacccaggtgccaaaaccatagaa
ggggacctcgaagaggccctttttcacgccggtgctgtccctgaacatgaccgtggcatc
cccaagcgctatgactgggctcgttctgctcgtacggataagggcgtgagcgctgtggga
caggttgtctcgggccggttctacatcgacccgcctggacttgtggaacgcttgcattca
aatctttctcctcagattaggatattcgggtacaagagagtgacgggttcgtttaatgct
aagaagttttgtgatcggagaaggtacgtctatttaattcctgtttttgctcttgatcca
tgcgcgcatcgtgatagggagagcgtgttagctagtttagggtctggtagtgagcttgtt
aagtgcttgcagtgttcagaaagagggcgtaaggttgttggtgctgtgggtaagcgcagc
tttgaatcaaaatctgatgtttccccaacagaaatttggtcaaatgataaagatactact
gtaaaatccgaaattaaagaggaggttagtggtcttatggataatggtgatggagatatt
aggaattctgaatctgttaatgaaactaaggtctttaaaaatgaagacgacggtaaaaaa
tctgaaacgactgagtcaggcatttcatcaaacagtgaagatgctaatgccaaccccgaa
attaaagatgagataatggtgtccattgggaatggtgatgataaaaatacaacatcagaa
gaggaagcgattaagggaagtggattttgttacggagagaaggagaaagagagattcaat
cgaatattgaattattacgtggggagtcataacttccataattttaccactagaactaag
gctgaagacccctctgctcagcgctacatcatttcatttgatgcgaagactacatttact
gttgaaggcattgagtttgttaagtgtgaggttgttgggcagagtttcatgcttcatcag
atacggaagatgattggtgttgccgtggctattatgaggaactgtgcatgtgagtcgttg
atacaaacagctctgcaaaagcatgttaacatcaatgtgcctacagctcctgaggttggg
ttatacttggatgagtgctttttcacatcatataatcagaaatggaaagacagccatgaa
gaactttccatgaaagattatgaagaggaagcaaacgaattcaagatgaagcacatatac
tcacacattgcgacaacagaacacaaggaaggatcggtggctctgtggttgcattctctc
aactaccgaaactatcctgatcttcgtctttgcgacaatggagataatatcacctgtgaa
gacaataatggcagggaaagcactatggttgaaaacatgactgagtgtacaacttag
DBGET
integrated database retrieval system
