Populus alba (white poplar): 118062013
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Entry
118062013 CDS
T07314
Name
(RefSeq) vacuolar protein sorting-associated protein 35B
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
palz
Populus alba (white poplar)
Pathway
palz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118062013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118062013
Membrane trafficking [BR:
palz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
118062013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
118062013
NCBI-ProteinID:
XP_034931570
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All DBs
Position
5:complement(22134930..22141896)
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AA seq
790 aa
AA seq
DB search
MILAGIEDEDKWLAEGIAGIQHNAFYMHRALDANNLRDALKCSALMLSELRTSKLSPHKY
YDLYMRAFDELRKLEMFFKDESRHGVSIVDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDALKDLVEMCRGVQNPIRGLFLRSYLAQVSRDKLPNLGSEYEGGEDTAMDAVEFVL
QNFTEMNKLWVRMQHQGPVRIREKLEKERNELRDLVGKNLHVLSQIEGVNLEIYRDTVLP
RVLEQIVNCKDELAQYYLMDCIIQVFPDEYHLQTLETLLGACPQLQPTVDIKTVLSRLME
RLSNYAASSPDVLPEFLQVEAFAKLSSAIGKVIEAQVDMPIVGAVTLYVSLLTFTLHVHP
ERLDYVDQVLGACVKLLFGKPKLEEGRATKQIVALLSAPLEKYNDIVTALTLSNYPRVMD
SLDDETNKTMAMVIIQSIMKNNTCISTADKIEVLFELLKGLIKGLDGTAADELDEEDFNE
EQSSVARLIHMLYNDDSEEMLKIICTVRKHIMAGGPTRLPFTVPPLIFSALRLVRKLQAQ
DGNVVGEEEPATPKKIFQLLNETIEALSSVPSPELALRLYLQCAQAANDYDLEPVAYEFF
TQAFILYEEEVVDSKAQVTAMHLIIGALQRMNVLGVENRDTLTHKATGYSAKLLKRPDQC
RAVYACSHLFWVDEKDGIKDGERVLLCLKRALRIANAAQQMANAVSGTSGPVTLLVEILN
KYLYFFEKGNPQVTSAAIQGLVELITNEMQSDSTTPDPASEAFFASTIRYIQFQKQKGGV
VGEKFGPIKV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatcttagccggaatagaagacgaagacaaatggctagcagaaggaatcgccggcatt
caacacaacgccttttacatgcatcgcgctttggacgccaacaatctccgagacgctctc
aaatgttcagctctaatgctatcagagcttcgaacttctaaactctctccgcacaaatac
tacgatctctatatgagagcgtttgatgaattgaggaaactagagatgtttttcaaagac
gagagtaggcatggcgtttcgattgttgatttatacgaactcgtgcagcatgctggcaat
atattgcctagactgtatctactgtgtacggtaggatcagtgtatatcaaatcgaaggag
gctccggctaaggatgcgcttaaggatcttgtagagatgtgtcgcggtgttcaaaatccg
attcgaggattgtttttgagaagttatcttgctcaagttagtagagataaattacccaac
cttgggtccgagtatgaaggaggtgaggacacagcaatggatgcagtagaatttgtgctg
caaaatttcaccgagatgaataaactttgggttcggatgcagcatcaggggcctgttagg
attagagagaagctggaaaaggaaagaaatgagctccgtgatcttgtagggaagaatctc
catgttcttagtcagattgagggcgtgaaccttgaaatttacagagacactgttcttccc
agagttttagagcagattgtcaactgtaaagatgagctggcacagtattatttaatggac
tgcataattcaagtctttccagatgagtaccacttgcagacccttgagacattgttgggg
gcctgcccccagcttcagccaacagttgacattaagacagtgctttcacgattaatggaa
agattgtccaattatgctgcttcaagtccggatgttttacccgagttcctacaagtagaa
gcttttgctaaattgagcagtgctattggaaaggtgattgaagcacaggttgacatgcct
attgttggagccgttactttgtacgtgtctctcctcacatttacactacatgttcatcct
gaacgccttgattatgtggatcaagtactgggggcatgtgttaagctcctctttggcaag
ccaaagcttgaagagggcagagcaacaaaacaaatagttgcacttctgagtgctccatta
gaaaagtacaatgacattgtcactgccttaacgctgtctaattaccctcgtgtcatggac
tctcttgatgatgaaacaaataaaaccatggcaatggttattattcagagcattatgaaa
aataatacttgcatttctactgctgacaagattgaggtgttgtttgaattattaaaagga
ctgataaagggtctggatgggactgctgcagatgagctcgacgaggaggatttcaatgaa
gaacaaagttctgtcgctcgccttatacatatgctttataatgatgattcagaggaaatg
ttgaagattatctgcactgtgaggaagcatataatggctggagggccaacacgattacct
tttacagttcctcctctcatattctctgcactcaggttggtgagaaagttgcaagctcag
gatggaaatgtagtaggagaagaagagcctgcaacacctaagaaaatttttcagcttctg
aatgagacaattgaggcactttcatcggttccctcacctgagctggcattaaggttgtac
ttgcaatgtgctcaggctgccaatgactatgatcttgagccagttgcttatgaatttttt
acacaggcattcatattatatgaagaagaagttgtggactcaaaggcccaggtgactgca
atgcatctaataatcggggctctccagaggatgaatgtattgggtgttgagaacagggac
actctaacacacaaggccacaggatattctgcaaagcttttgaagagacctgatcagtgc
agagcagtgtacgcttgctcacatctattttgggttgatgaaaaggatggcatcaaggat
ggggaaagggtcctcctttgcctcaagcgtgccttgagaattgcaaatgcagctcagcag
atggccaatgcagtaagtggtacaagtgggccggtcacattgttggttgaaatattgaac
aagtacctgtacttttttgagaaaggaaacccacaggttaccagtgctgcaatccagggg
ctggtagaattaatcactaatgagatgcagagtgactccaccacaccagatccagcgtca
gaagccttctttgccagcacaatccggtacattcagttccagaaacaaaagggaggtgtc
gtgggtgagaaatttgggcctatcaaggtgtaa
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