Populus alba (white poplar): 118062140
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Entry
118062140 CDS
T07314
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''alpha isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
palz
Populus alba (white poplar)
Pathway
palz03015
mRNA surveillance pathway
palz04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118062140
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118062140
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
palz01009
]
118062140
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118062140
03036 Chromosome and associated proteins [BR:
palz03036
]
118062140
Protein phosphatases and associated proteins [BR:
palz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
118062140
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
118062140
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
118062140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
Phage_Inh_C
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
118062140
NCBI-ProteinID:
XP_034931725
LinkDB
All DBs
Position
5:21080054..21088324
Genome browser
AA seq
541 aa
AA seq
DB search
MDIDRVAGEEVCCLDTEQLQLPEVSSFVLKENPQLPEVLFSQWLSLSDTTRLVKTLIDDA
KAGNPINIPGISANVSVGGVNSLPSMFPAGSAPPISPRSSSGSPRTSKQKTSPSSLRSPL
KLVRESEWEVIPQFYFRNGPPAASALKEQCLSRINHLFNNDLDGLLIDEFKPVTKIVCKL
PSFFSDVLFRKIDVDCTGMVTRDAFVKYWVNSNMLTLDTATQVFNILKQPDCRYLSQSDF
KPILRELLATHSGLEFLQNTPEFQERYAETVIYRIFYYINRSGNGRLTLRELKRGNLIAA
MQHADEEEDINKVIRYFSYEHFYVIYCKFWELDTDHDFFIDKENLIRYGNHALTYRILDR
IFSQVPRKFKSNVEGKMCYEDFVYFMLSEEDKSSQPSLEYWFRCLDLDGNGVLTPNELQY
FYEEQLHRMECMAQEPVLFEDILCQIVDMIAPEREGYITLRDLKGCKLSGNVFNILFNLN
KFVAFESRDPFLIRQEREEPTLTEWDRFAHREYIRLSMEEDVEDVSNGSAEVWDESFEAP
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggatattgatagagtagcaggagaagaagtttgttgtttggacacagaacagctgcag
ctaccagaagtttcttcttttgtgcttaaagaaaaccctcaacttcccgaggtcttgttc
tctcagtggctttcgctttctgacaccacccgattggtgaaaactttaattgatgatgca
aaagctggcaatcccattaacatccctggcatctctgctaatgtgagtgttggtggggtc
aattcattgccttccatgtttcctgctggcagtgcacctccgatttcaccaagaagttca
tctggttctccacgcacgtctaagcagaaaaccagtccctcgtctttacgttctccatta
aaattagttagggaatcagaatgggaagtcatacctcagttttattttcgaaatggtcct
ccagcagcaagtgcactcaaagaacaatgtctttctagaattaatcatcttttcaacaat
gatctggatggattgctcattgatgaatttaaacctgttacaaagatagtttgcaagtta
ccatccttcttttccgatgtgctttttagaaagattgatgttgactgcaccgggatggtg
accagggatgcatttgttaaatactgggtgaatagcaacatgcttacgctggacacagca
actcaagtattcaatattctaaaacagccagactgcagatacctctctcagtctgatttc
aaacctattctccgagaacttctggcaactcattccgggttggaattcttacagaacact
cctgaatttcaagaaagatacgctgaaactgtcatatacagaatattttactacatcaat
agatcaggaaatggccgtcttacactcagggagctgaagcgtggaaatcttattgctgca
atgcaacatgcagatgaagaagaagacattaacaaagttataaggtacttctcgtatgaa
catttctatgtaatatattgtaagttttgggagctggatacagaccatgatttctttatc
gacaaagagaatctcatcagatatggtaatcacgcccttacctacaggattcttgataga
atattttcacaggtgccaaggaagtttaaaagcaatgttgaagggaaaatgtgttatgaa
gattttgtttatttcatgctctctgaggaagacaaatcatctcagcccagtcttgaatac
tggttcaggtgcttagatttagatgggaatggtgtgttgacacccaatgaattgcaatac
ttctatgaggagcagctgcaccgtatggaatgcatggcccaggaacctgtgctatttgag
gatatcttgtgtcaaatagttgacatgattgcaccagagagggaaggttacatcacactg
cgtgatttgaaaggatgcaaactttcaggaaatgttttcaatattcttttcaacctcaat
aagtttgtagcctttgaaagccgtgatccctttcttattcgccaggagcgcgaggaacca
actttaacagagtgggatcgctttgcacatagagagtacatcaggctttcaatggaagag
gatgttgaagatgtctcaaatgggagtgcagaagtttgggatgaatcatttgaggctccc
ttttag
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