Populus alba (white poplar): 118062585
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Entry
118062585 CDS
T07314
Name
(RefSeq) chaperonin 60 subunit beta 2, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
palz
Populus alba (white poplar)
Pathway
palz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118062585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118062585
03110 Chaperones and folding catalysts [BR:
palz03110
]
118062585
03029 Mitochondrial biogenesis [BR:
palz03029
]
118062585
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
palz04147
]
118062585
Enzymes [BR:
palz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
118062585
Messenger RNA biogenesis [BR:
palz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
118062585
Chaperones and folding catalysts [BR:
palz03110
]
Heat shock proteins
HSP60 / Chaperonin
118062585
Mitochondrial biogenesis [BR:
palz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
118062585
Exosome [BR:
palz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118062585
Exosomal proteins of other body fluids (saliva and urine)
118062585
Exosomal proteins of breast cancer cells
118062585
Exosomal proteins of colorectal cancer cells
118062585
Exosomal proteins of bladder cancer cells
118062585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Antitox_halo
Motif
Other DBs
NCBI-GeneID:
118062585
NCBI-ProteinID:
XP_034932289
LinkDB
All DBs
Position
14:complement(483382..487800)
Genome browser
AA seq
607 aa
AA seq
DB search
MASTFTAMSSVGTLAAPNGRVMDKKFVFSSNKLSSFASISASRFGRPQNVVLPRSRSLKV
NAAKELHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAK
EVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITR
GIEKTTRALVNELKLMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEE
GKSADNSLYVVEGMQFDRGYISPYFVTDSEKMSVEYENCKLLLVDKKITNARDLISILED
AIRAGYPVLIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGT
VIREEVGLSLDKVGKEVLGHASKVVLTKDTTTIVGDGSTQEAVNKRVAQIRNLIEAAEQD
YEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTL
LRLASKVDAIKDSLENDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSTDNPKF
GYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPVPAGNPM
DNSGYGY
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgacttttacggccatgtcctcggttggaaccttggctgctcccaatggccgt
gttatggataagaagtttgtattttcttcaaacaagttgtcatctttcgcttccatttct
gcaagtcgatttggtaggccacaaaatgtagttctaccaagatcacgttctctcaaggtt
aatgctgccaaggagctgcacttcaacaaggacggttctgcaattaagaaattgcaaact
ggtgtgaacaagcttgcagatttagtcggggttacccttggacctaaaggccggaatgtt
gttcttgagagcaaatacggttcgcctaaaattgttaatgatggtgtgactgttgctaaa
gaggttgaattggaggatccggttgagaatattggtgctaagttagtgagacaagctgct
gccaagacaaatgacttggctggtgatgggactacaacatctgttgttcttgcgcaaggc
cttattgcagaaggtgtcaaggttgtggctgctggtgcaaaccctgttttaatcactaga
ggcattgagaagaccacaagagctcttgtaaatgaacttaagttgatgtcgaaagaggtt
gaagacagtgaacttgcagatgtggcagctgttagtgctgggaacaactatgaagttggg
aatatgatagctgaagctatgagcaaagtcggtcggaagggagtggtcacccttgaagag
ggaaagagtgctgataacagcctctatgttgttgagggaatgcagtttgaccgtggttat
atctcgccttactttgtcactgatagtgaaaaaatgtcagttgaatatgagaactgcaag
ttgcttcttgttgacaagaaaataacaaatgcaagagatctaatctccattttggaagat
gcaattagagctggatatccagttttgataattgctgaagacattgaacaagaagcttta
gcaactcttgttgtcaataagcttaggggtgctttgaagattgctgccctcaaagctcct
ggttttggggaacggaaaagtcagtaccttgatgacattgctattctgactggaggaact
gttatcagagaagaggtggggctttccttggacaaagtaggcaaagaggtcttgggacat
gcttctaaagtggttcttaccaaggacacaacgaccattgttggtgacggaagcacccaa
gaagcagtaaataagagagttgctcaaattagaaatcttatcgaggctgctgaacaagac
tatgaaagggagaaactcaatgaaagaattgccaagctgtccggcggtgttgcagtgata
caggttggagcacaaaccgagacagagcttaaagaaaagaaactgagagttgaagatgct
cttaatgcaaccaaggcagccgttgaggaaggtattgtggttgggggtggatgcaccctg
ctgagactagcatcaaaggttgatgctatcaaggacagtcttgagaacgatgaagaaaag
gtgggagcagacattgtaaagagagctctgagctaccccctgaagttaattgccaaaaat
gctggtgttaatggaagtgtggtcagcgagaaggtgctctcaactgacaatcctaaattt
ggatacaatgctgcaactggaaattatgaagatctgatggctgctggaatcattgatcca
acaaaggtcgtcagatgttgcctggagcatgcatcatcggtagcgaagactttcttgatg
tccgactgtgtagttgttgagattaaggagcctgaaccagttcctgctggcaaccctatg
gataactcaggatatgggtactag
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