Populus alba (white poplar): 118062587
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Entry
118062587 CDS
T07314
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118062587
04121 Ubiquitin system [BR:
palz04121
]
118062587
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118062587
Membrane trafficking [BR:
palz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
118062587
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118062587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
118062587
NCBI-ProteinID:
XP_034932292
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All DBs
Position
14:complement(528374..531047)
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AA seq
371 aa
AA seq
DB search
MAARYWCHMCSQMVNPIMGVEIKCPFCQNGFIEDMIDSTGDNQVPDSEFGSDRALSLWAP
ILLGMVGNSHRRRRLRRVEYEEDEDGNDDGEANHAGEPEFEREIESFMRRRRRSRRNSAT
ILQLLQGIRAGILVSESENLEGDRDRDRVRDMDRERERVILINPFNQSIIVQGSYDSNNV
QNQNQNAIGSLGDYVIGPGLDLLLQHLAENDPNRYGTPPAQKEAIEALPTVTVKEPLQCS
VCLDDFEIVAEAREMPCKHKFHSGCILPWLELHSSCPVCRHQLPADESKLDSERSRNAFD
QRDSESNISNGINVEEGDGEARSGNGRRFSFPWPFNSLFSSSSGSQSGRSHPSSTASSSN
APGSASQTDEN
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacgctactggtgccatatgtgctctcaaatggtaaatcccatcatgggagtt
gagatcaaatgccctttttgccaaaatggtttcattgaagatatgattgatagcactggg
gataatcaggtccctgactctgaatttggatctgatcgtgccctctccctttgggcccca
atcttgcttggcatggtgggaaattcccatcgtcgtagaaggcttagaagggtggagtat
gaagaagatgaggacggaaatgatgatggtgaagcaaaccatgcaggagaacctgaattt
gagcgtgaaatagaatcattcatgaggaggaggaggaggagcagaagaaactcagcaaca
atattgcaattgcttcaaggaattcgtgctggaattttggtatctgaatccgagaacttg
gaaggagatagggacagggatagggttagggatatggacagggaaagagagcgtgtcatt
ttgatcaatccatttaatcaaagtatcattgttcagggttcttatgattcaaacaatgtt
caaaaccagaatcaaaatgcaattgggtcattaggtgattatgtcattggacctggcttg
gatttgttattgcagcacttggcagagaatgatcctaatagatatggaactccaccagct
caaaaggaagccattgaggcattgcctactgtaactgttaaggagcctttgcagtgttca
gtgtgcttggatgattttgagattgttgctgaggcaagggaaatgccatgtaagcacaag
tttcatagtgggtgtatattgccatggctggagcttcatagctcctgtccagtttgcagg
catcagttgcctgctgacgagtccaagcttgattctgagagatctagaaatgcctttgat
cagagggacagtgaaagtaatattagtaatggaattaatgttgaagagggagatggggaa
gcaagaagtggaaatgggagaaggttttcctttccatggcctttcaatagtttattttca
tcttcatctggttctcaatctggtagaagccatccatcctcaacagcatcctcctcaaat
gcaccaggaagtgcttctcaaacagatgagaattga
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integrated database retrieval system
