Populus alba (white poplar): 118062800
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Entry
118062800 CDS
T07314
Name
(RefSeq) autophagy-related protein 13b isoform X1
KO
K08331
autophagy-related protein 13
Organism
palz
Populus alba (white poplar)
Pathway
palz04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
118062800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118062800
03029 Mitochondrial biogenesis [BR:
palz03029
]
118062800
Membrane trafficking [BR:
palz04131
]
Autophagy
Autophagosome formation proteins
ULK complex
118062800
Atg1 complex
118062800
Mitochondrial biogenesis [BR:
palz03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
118062800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
118062800
NCBI-ProteinID:
XP_034932532
LinkDB
All DBs
Position
19:4985276..4989576
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AA seq
609 aa
AA seq
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MASSNNSTDTEAAEMEQIITEFFPKSLQIILESRSPFMSSRNYSGEQMVSLSPSSSSSSS
PSVRPRDKWFNLALRECPAALENLDLWHQSYMEPMIVDVILVQVPPGRWDPVNYPPRREP
VRNFPTKDRYPFHWNSDEEELGCEGKIEKIVERWEVRYEGRKSRDSGTGSRKLSNTFQTC
YMKSILLFRSLYATVRLLPAYKIFRDLNSSGEIRAYTLTHRVSSFVEPFTRKEEAEMQRF
VFTPVDTSWGRLCLSVLYHSSLSDVRSESSTPMSPQFIPDYVGSPLAEPVKRFPSLPVSQ
GSLSSLPFSRQHNKALPPSFSFSPSPNRSGKHGSISNPSSCRFQPSSLPPHPPEVSSVHE
KNTSFDEHYPSPSYTPSPSPSPPICIPESHLSTVVLQSESAPFSIPATKHASSPLLSNKQ
NLPPSPPLKATTSCNPKTDESTGLVHPRAADEKLFSPGKDDIRKYASMKTLSNSSPRISF
SRTSSRPETLDKKGHLSDPLEPGGLFPIKKSQDAAVGAPVHTLKKPPPLCQDLSGSADLP
PDSRSKMWSCNLQEYNPISGTQAGQQAAASGVASSGLIASKTAADALEELKRYEEMKDSL
LSQAGRSNA
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatctaataatagtaccgacactgaggctgcagagatggaacaaattatcact
gaattttttcctaagagtcttcagattatacttgagtcgaggtctcctttcatgtcctcg
cgtaattatagtggtgaacaaatggtatccttatctccatcttcttcgtcctcctcctcg
ccgagtgtgaggccaagagataaatggttcaatttagctcttagggaatgcccggctgct
cttgagaatcttgatctctggcaccaaagctatatggaaccgatgattgttgatgtgatt
ttggtgcaggtgccaccaggtcggtgggatcctgtgaattatccccctcgaagggagcct
gttaggaattttccgaccaaggatcggtatccatttcactggaattcagatgaggaagaa
ttagggtgtgagggtaagattgaaaagattgtagagaggtgggaagtgcggtatgagggt
aggaagtcaagggatagtggtactgggagcaggaaacttagcaacacctttcaaacatgt
tatatgaaatcaatattacttttcaggtctttgtatgcaactgttaggcttttacctgca
tataaaattttccgtgacctcaattcatcaggggaaattcgtgcatacacacttacacat
agggtgtcttcttttgttgagcccttcacacgcaaagaagaggctgaaatgcagcgattt
gtgttcactccagtggatacttcctggggtaggctttgcctttcggtgctgtatcactct
tcattatcagatgtcaggtctgagtcgtcaacacctatgtccccccaatttatcccagat
tatgttgggagccctttggcagaaccagtgaagagattcccctctcttcccgtgtcgcaa
ggttctctttcatctttgccattctcaagacaacataataaagccttaccaccttcattt
tctttctcaccatcacctaatcgctcaggaaagcatggatcaatatctaatcctagttcc
tgtcgattccaaccttcaagcttgcctcctcatccacccgaagtgtcttcagttcatgag
aagaatacgagctttgatgaacattatccctctcctagctatacaccatctccatcccca
tcaccaccaatctgtattcctgagagtcatctttccacagttgttttacaatctgaaagt
gcaccttttagcatacctgctaccaagcatgctagttctcccctgttgtccaacaagcaa
aacttgcccccatctccaccactcaaagctaccacatcttgcaatccgaagactgatgaa
agtacaggtttggttcaccctcgtgcagcagatgagaagttgttctctcctgggaaagat
gacattagaaaatatgccagcatgaaaacactatccaacagctctccacggatttcattt
tccagaacttccagcagacccgagacacttgataaaaaaggccatctatctgaccccctt
gagcccggaggtctctttccgattaaaaaatcccaagatgcagctgttggtgctcctgta
cacacgctgaagaaacccccacctttatgccaagacctctctggttcggctgatttgcca
ccagattctaggtccaaaatgtggagctgcaacctccaagaatacaatccaatctccgga
acacaagcgggtcagcaggctgctgcgtctggtgttgcatcttcaggtctcattgcttca
aaaacagcagctgatgcattggaagaactgaaaagatacgaagaaatgaaagactcgttg
cttagccaagctggcaggtccaacgcttaa
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