Populus alba (white poplar): 118062940
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Entry
118062940 CDS
T07314
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118062940
Membrane trafficking [BR:
palz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
118062940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
118062940
NCBI-ProteinID:
XP_034932722
LinkDB
All DBs
Position
3:complement(11838592..11847274)
Genome browser
AA seq
1405 aa
AA seq
DB search
MATNPPFNVMEDQTDEDFFDNLVDDDDFRPTNSDSAPKFTEGSDSDEAKAFANLSIEDAK
GGFEGKGEINSGDDAAGLDDVKAEESNALESVNPLGLSDGLVESNNDGIGSAVVPEAIVS
QSSESMKSGVKEVGWGSFYADSAENGFGSSADFFNDFGGISEDFPVKTVESVGNLKNTDG
GGLDDSVCYQKYQDGAHVYAGLVENVNEQDLNSSQHWENMYPGWKYDANTGQWYQVDAFD
ATASVQGIVDGALGGEWASASASDGKTEVNYLQQTSQSVVGTVAETSTIESVSSWNQVSK
GNNNGYPEHMVFDPQYPGWYYDTMVGEWCSLESYTSSAKSTTVQTNGQQNQNGFAFSDPY
LQNSSSTYAEYGQAGKYGSQGYNSQGQHGSWDESYGNNQQNLNMWQPQTTAKIDAVSNFG
GNLQLDKSYGSNFSMNNHVDQQKAINSLGTVPSYDKAGQSNAEANELVGLQNFVPGGSFS
QQYNQGTVKQNEQANFSNDYSFSQEQVSVTHQSFQSNQQFSYAPNTGRSSAGRPPHALVT
FGFGGKLIVMKDGSSLRNTYFGNQDHVGGSISVMNLMEVLSGSSDNSSSVGGSTCCYFDA
LCQQSFPGPLVGGNVGNKELNKWIDERIAHCELPDLNHKKGKALRLLLSLLKLACQHYGK
LRSSFGTDNLLKESDAPESAVAELFGSVKRNGTQFSEFGALDHCLQNVPSEGQIRATASE
VQHLLVSGRKKEALQSAQEGQLWGPALVLASQLGDQYYVDTVKLMALRQLVAGSPLRTLC
LLIAGQPAEVFSTNATGHGGLHGDFGTPQQPVQLGTNGMLDDWEENLAVITANRTKDDEL
VLIHLGDCLWKDRSEITAAHICYLVAEANFESYSDTARLCLIGADHWKHPRTYASPEAIQ
RTELYEYSKVLGNSQFILLPFQPYKLIYAYMLAEVGKVSDSLKYCQVVLKALKTGRAPEV
ETWKQLALSLEERCRAHQQGGYTTNLAPAKLVGKLLNFFDSTAHRVVGGLPPPVPSASQG
SVQDSHHQLVAPRVSGSQSTMAMSSLMPSASMEPISEWAADGNRMTMHNRSVSEPDFGRS
PRQVDSSTEGTSSSAQSKASGPAVSSRFGRFGFGSQLLQKTVGLVLRPRSDKQAKLGEKN
KFYYDEKLKRWVEEGAEPPAEEPALAPPPTTLGFQNGGSDYNLKSSLKSDVSSTDGSPPF
KSPTPMDHTSGIPPIPIGSNQFSARGRVGVRARYVDTFNQGGGSPANLFQSPSVPSVKPA
VAANAKFFVPTPAPPHEYSMEAIAENIQEDSATTENPSTSNMNKNGPSHPSTSSAPTMPR
FSSMDNITRKGAMINGNGPVSSHSRRTASWSGSFSDSFSPPKAVESKSQGEMLSMSPSSF
MPSNHSMTRMSSSGSFGDDLHEVEL
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggctacgaatcctccatttaatgtgatggaggatcagacggatgaggatttctttgat
aatttagttgatgatgatgattttagacccactaattcggattcagcccctaagttcact
gagggaagcgattccgatgaggcgaaagcctttgccaatctcagtattgaggatgcaaaa
ggtggattcgaagggaagggtgaaatcaattcgggtgatgatgctgcaggattggatgat
gtgaaggcggaagagagtaatgcgttggagtcggtgaatccgctgggcttgtctgatggg
ttggtcgagtctaataatgatgggattggatctgcggttgtgcctgaggctatagttagt
caaagtagtgaatccatgaaatcaggggttaaggaagtgggctggggttcattttatgca
gattctgcagagaatgggtttggttcatccgctgatttctttaatgattttggaggcatt
tcagaggattttcctgtgaaaacagttgaaagtgttggtaatttaaagaacacggatggt
ggaggattggatgattcggtctgttaccagaaatatcaagatggtgcacacgtttatgca
ggattggtggagaatgtgaatgagcaggacttgaatagcagtcagcattgggaaaacatg
taccctggatggaagtatgacgcaaacactggacaatggtatcaagtggatgcttttgat
gctacggcaagtgtgcaaggaattgttgatggtgctttggggggtgaatgggcttcagct
tctgcctctgatgggaaaacagaggttaattatttgcagcagacttcacagtctgtggtg
ggaactgtggctgagactagtacaatcgagagtgtgtctagctggaatcaggtttccaaa
gggaataataatggttaccctgaacacatggtttttgacccacaatatcctggttggtat
tacgacacaatggtaggggaatggtgctctctggaaagttacacatcatcagcaaaatca
acaactgttcaaactaacggtcagcagaatcaaaatggatttgcatttagtgatccgtat
ttgcaaaatagtagtagcacatatgctgagtatgggcaagctggcaagtacggttcacaa
ggctataatagccaaggccaacatggcagctgggatgagtcttatggtaacaatcagcag
aatttgaatatgtggcaacctcagactactgctaagatagatgctgtttcgaattttggt
ggaaacctgcaattagataaatcatatggttcaaacttttccatgaacaaccacgtggat
cagcagaaagctatcaattctctggggacggttccatcatatgacaaagctggtcaaagt
aatgctgaggctaatgagcttgttgggttgcaaaattttgtacctggtgggagcttcagt
cagcagtataatcagggaactgtaaagcagaatgaacaagcaaacttttcaaatgattac
agtttcagtcaggaacaagtaagtgtcacccatcaatcatttcagagtaaccagcagttt
tcttatgctcccaacacagggagatcctctgctggccgtcctccacatgcattggttact
tttggatttggtgggaagctcatagtaatgaaagatggcagttctctcaggaacacatac
tttggcaaccaggatcatgtaggaggctcaatctctgtaatgaacttgatggaggttttg
tcaggaagtagtgataattcttcaagtgttggagggagtacttgctgttattttgatgct
ctctgccaacagtcctttccaggtccgttggtgggtggcaatgttggaaataaagagttg
aataagtggattgatgagaggattgcacactgtgaattgcctgatttgaatcataaaaaa
ggaaaagcattgaggttgcttctttctttgcttaaattagcttgtcaacattatggaaaa
cttcgatcatcttttggaactgacaatttattaaaggagagcgatgctccagaatcagca
gttgcagaactttttggatctgtcaagaggaatggcacccaattcagtgagtttggtgcc
cttgaccactgcttgcagaatgtgccgtctgaaggacaaattagggcaactgcttctgag
gtacaacatcttctggtttctggtagaaaaaaagaggccctacagtctgcacaagaaggc
cagttgtggggacctgcacttgttcttgcatcacagctgggtgatcagtactatgtcgat
actgtcaagctaatggcacttcgccagctggttgctggatctcctttgcggacattatgc
ttgctaatagcagggcaaccagctgaggtattttccacaaatgctactggacatggtggc
cttcatggtgattttggtacacctcaacaacctgtacagcttgggacaaatggaatgctt
gatgattgggaagagaatttggctgtaataactgcaaacagaacaaaagatgatgaactt
gtgctcatacatcttggagattgcctatggaaggatagaagtgagattactgctgcacac
atctgctatttagtagcggaagcaaactttgagtcgtattcagacactgcaaggctatgc
ctgattggagcagatcactggaagcatcctcgaacatatgctagtccagaggctattcag
agaactgagttgtatgaatactcaaaggtgcttggtaactcccagtttatcctgctgcca
tttcagccatataagctcatatatgcatacatgctggctgaagtgggcaaggtctctgat
tcactcaagtattgtcaggttgttttaaaagccctaaaaactggtcgagctccggaagta
gaaacatggaaacagttagcgctgtcccttgaggaaagatgcagagctcatcagcagggt
ggatacaccacaaatttggctcctgcaaagttagttggcaagttgctcaacttttttgat
agcactgcacatcgtgttgtcgggggcctaccaccaccggtaccatcagcatcacaagga
agtgtgcaagatagccatcaccaactggtggctcccagagtctcaggcagtcagtcaaca
atggccatgtcatcactaatgccttctgcttcgatggagcccataagtgaatgggcagct
gatggaaatagaatgacaatgcataacagaagtgtttcagagccagactttggtagaagt
ccaagacaggttgattcatcaacagaaggaacttcatccagcgcacaaagcaaggcatca
ggcccagcagtgtcatctcggtttggtcgttttggttttggttcacaacttttgcagaag
actgtggggctagtcttaagacctcggtcagataaacaggctaaactaggtgaaaagaac
aaattttattacgatgaaaagctcaagagatgggtggaggaaggtgctgaacccccagct
gaagaaccagccttggctccccctccaacaactctaggcttccagaatggagggtctgac
tacaacttgaaatcctcattgaagagtgatgtatcttcaacagatgggagcccaccgttt
aagagtcccactccaatggaccatacctcagggattccacctattccaatcggttcaaat
caattctcagctcgcgggcgcgtgggtgtacgagcaaggtatgttgacacctttaaccaa
gggggtggaagcccagcaaatctgttccagtccccgtctgttccatctgtcaaacctgct
gttgctgcaaatgcaaagttttttgttcccacacctgcaccaccacatgaatactctatg
gaagctatagcagaaaacatacaagaagacagtgcaactactgaaaacccttcaacatct
aatatgaacaagaatggcccttcacatccttcaacatcttcagcaccaactatgccaagg
ttttcaagcatggataacattacaaggaagggggccatgataaatggcaatggccctgtt
tcatcccactcgcgacgaacagcatcttggagtgggagcttcagtgattcatttagtcct
cccaaggcggtagaatccaaatcacaaggggagatgttgagcatgtccccttcatcattt
atgcctagcaaccattccatgactcgtatgtcaagtagtggcagttttggtgatgacctt
catgaggtggagctttga
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integrated database retrieval system
