KEGG   Populus alba (white poplar): 118062946
Entry
118062946         CDS       T07314                                 
Name
(RefSeq) DNA repair protein RAD5B
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
palz  Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:palz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:palz03400]
    118062946
DNA repair and recombination proteins [BR:palz03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    118062946
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4 zf-C3HC4_3 DEAD zf-RING_UBOX ResIII zf-C3HC4_2 zf-RING_2 zf-C3HC4_4 Prok-RING_4 zf-RING_5 RING_XB3-XBAT31 Baculo_IE-1 zf-RING_4 KinB_sensor
Other DBs
NCBI-GeneID: 118062946
NCBI-ProteinID: XP_034932728
LinkDB
Position
3:12357094..12363272
AA seq 937 aa
MSTRTGTGIRVQTHVRKELADENVVEVETDDFPEEKDWYLVGGSLITASSTTKGRKLVDN
EIVHFGFSSFGSKYHRQGIIRFSTKRFGEIGRLPMEWGKSVVPLVSSGKVIVRGRCVAAP
ENLQMLQDVVLYVSFYVHQSIFTELCISTWRLDAPSNIDPTAHPLATLFKLLDMKPYQKA
EFSPAELDSRKRPLNYEDPEEDAVMLHVVKRGSGCQQDQEKDEQAFSESSLNKLVGAVDT
YDLEEMEPPWTLTCNLKPYQKQALYWMAASEKGNKAEKAAETLNPCWAAYRISDKRASSP
SIYLNIFSGEATTQFPTASQMTKGGILADAMGLGKTVMTIALILARPGKGSSDCEERVNR
IEDPRTKTMPKAKGGTLIICPMALLGQWKDELETHSEPGSISIFVHYGGYKTNNPRIISG
YDVVLTTYGVLTEAYKHDMENSIFNRVEWHRVVLDEAHTIKSWKTLAAKATFSLSSYCKW
CLTGTPIQNTLEDLYSLLCFLHVEPWCNWPWWNKLIQRPHENGDPRAMKLIKAILRPLML
RRTKDTKDKEGRPILVLPPTDIQIIKCEQSEAERDFYDALFRRSKVQFDEFVAQGKVLHN
YASVLELLLRLRQCCNHPFLVMSRTDIQRYEELNKYARRFVDTNSNSSTPRQSAATEACI
EGVVEAIRHASSATISPSAPTPAYIEEVVEGIRRGENTECPICMESADDPVLTPCVHRMC
RECLISCWQTPISGICPICRTSLKANDLIACPTEGKFQVDVENDWKESSKVSKLLECLEH
IHRSGFGEKSIVFSQWTSFFDLLEIPLKRRGIGFLRFDGKLAQKQRERTLKEFNETREKM
VLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVESTV
EERLQQVQAKKQRMIAGALTDEEVRSARIEELKMLFR
NT seq 2814 nt   +upstreamnt  +downstreamnt
atgagcacgcgaacaggcaccgggattcgggttcaaacccatgtcagaaaagaattggct
gatgagaatgttgttgaagtggaaactgatgattttccagaagagaaagattggtacttg
gttggtggctctcttattacagcttcatcaactactaaaggaaggaaattggtggacaat
gaaatcgtccattttggtttctctagttttggctccaagtatcatagacagggcattatt
cgattctctactaaaagatttggagagattggtaggcttccgatggagtggggaaaaagt
gttgttccacttgtgagttctggaaaggttatagttcgtggacgatgtgtagctgcgcca
gagaaccttcaaatgttgcaggatgttgtgttgtatgtgagtttctatgttcaccaatcg
atattcactgagttgtgcatttcaacctggaggctagatgctccttcaaacattgatcct
acagctcacccccttgctaccttgttcaagttactggacatgaaaccatatcagaaggct
gaatttagtcctgcagagcttgactctcgaaagcgacccctcaactatgaagatccagag
gaagatgccgttatgttgcatgtagtaaaaaggggatcaggatgccagcaagatcaagag
aaggatgaacaagctttctctgagtcatctttgaataaacttgttggtgccgtagataca
tatgacttggaggagatggagcctccatggaccctaacctgtaatttgaaaccgtatcag
aaacaagctctctattggatggctgcatcagagaagggaaataaagctgagaaagcagca
gaaactctaaacccatgttgggcagcgtatcgcatatcagacaagagggcttcatcgcca
agcatttatttaaacatattttctggggaagccactactcaatttccaactgcatctcag
atgacaaaagggggaatactagctgatgcaatgggtcttggaaagacagtgatgacaatt
gctcttatactagcaagaccaggcaaaggaagctctgactgcgaagaaagagtaaacaga
atagaagatccccgcacaaaaaccatgcctaaagcaaagggtggcactcttattatctgc
cccatggctttgctaggccagtggaaggatgagcttgaaacccattcagagccaggaagc
atttccatttttgttcactatggcgggtacaaaacaaataaccccaggattatatctgga
tatgatgtggtcttgacaacatatggcgtcctaactgaagcttacaagcatgatatggag
aacagcatttttaatagggttgagtggcatagggtggtgctagatgaagctcataccatc
aagtcctggaagaccttagctgctaaggctacattttcattgtcgtcatattgcaaatgg
tgtcttactgggacacctattcagaacaccttggaagatctgtacagccttctgtgcttc
ttgcatgttgagccttggtgcaactggccatggtggaacaaattaattcaaagaccgcat
gaaaatggagaccctagagccatgaagttgatcaaggctattttgaggccgctaatgttg
agaaggaccaaggatacaaaggataaggaggggaggcccatacttgttcttcctccaact
gacattcaaataatcaagtgtgaacaatcggaagctgaacgtgatttttatgatgccctt
tttagaagatcaaaagtccagtttgacgagtttgttgctcagggcaaggttctgcacaac
tatgcatctgtccttgagctgctactacgactgaggcagtgttgcaaccacccatttctt
gttatgagtcgaactgatatccaacgatatgaggaattgaacaagtatgcaagaaggttt
gtggacacaaattctaattcttccactccaaggcagtcagctgccaccgaagcatgcatt
gaaggggttgttgaggccatccgccatgctagttctgccaccataagtccatcagcacct
actccggcatacattgaagaggttgttgagggcatccggaggggtgaaaataccgagtgt
cccatatgcatggagtctgcagatgaccccgtgctcacaccatgtgtacataggatgtgc
agggaatgtctcatctcttgctggcaaacaccaatatcagggatatgcccaatctgtcga
acttcactgaaagcaaatgacctgatagcatgcccaacagagggtaagttccaggttgat
gttgagaatgactggaaggagtcttcaaaggtttccaagcttctggaatgcttggaacat
atccataggtcaggctttggtgaaaagagcattgtttttagccagtggacttcatttttt
gatcttttagagatcccattgaaaaggagaggaattgggttcttaaggtttgatggaaaa
cttgcacagaagcagagagagaggactttgaaggagttcaatgaaaccagggaaaaaatg
gtattattgatgtctttaaaagctggtggcgtgggcctgaatcttactgcagcctcaaat
gttttcttaatggatccatggtggaatcctgcagtcgaggagcaagcaataatgagaatc
catcggataggacagaagcgaacagtttttgttagaagattcattgttgagagcacagtt
gaggaacgcctgcagcaagttcaggcgaagaagcagagaatgattgccggtgccctcacc
gacgaggaagtcaggtccgccaggattgaggaactcaaaatgctctttagataa

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