KEGG   Populus alba (white poplar): 118063179
Entry
118063179         CDS       T07314                                 
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5A
  KO
K14963  COMPASS component SWD3
Organism
palz  Populus alba (white poplar)
Pathway
palz03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    118063179
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:palz03036]
    118063179
Chromosome and associated proteins [BR:palz03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     118063179
    NSL complex
     118063179
   HMT complexes
    COMPASS/SET1 complex
     118063179
    COMPASS/SET1 complex (yeast)
     118063179
    MLL-HCF complex
     118063179
    MLL3/MLL4 complex
     118063179
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     118063179
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EML ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_SCAP WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_WDR19_1st Beta-prop_NWD2_C eIF2A WD40_like Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st RMC1_N Beta-prop_Vps41 Beta-prop_VPS8 Ge1_WD40 PALB2_WD40 VPS8_N WD_LRWD1 WDR54 DUF5888 BCAS3_WD40 Big_7 Calmodulin_bind
Other DBs
NCBI-GeneID: 118063179
NCBI-ProteinID: XP_034933027
LinkDB
Position
7:complement(3031476..3033693)
AA seq 317 aa
MPDPIESYKPYTLTQTLQGHKSSISSVKFSSDGRLLGSSSADKTIKTYSLSPSNPPTSPI
TPLHDFHGHEQGVSDLAFSSDSRFIVSASDDKTLRLWDVTTGSIIKTLHGHTNYVFCVSF
NPNSSMIVSGSFDETVRIWDVKSGKCLKVLPAHSDPVTCVDFNRDGSLIVTSSYDGLCRI
WDSGTGHCIKTLIDDENPPVSFVKFSPNGNFILVGTLDNNLRLWNFSTGKFLKTYTGHAN
TKYCISPAFSITNGMYIVGGSEDNFIYLWELQSRKIVQKLEGHTDTVISVACHPTQNMIA
SGAIGSDKTVKIWTQEK
NT seq 954 nt   +upstreamnt  +downstreamnt
atgccagacccaattgagtcctacaaaccctacaccctaacccaaaccctacaaggccac
aaatcctccatttcctccgtcaaattctcctccgacggccgtctcctcgggtcctcctcc
gctgacaaaaccatcaaaacctattcgctctccccatctaatcctcccacttccccaatc
actcctctccatgacttccacggccacgaacaaggcgtctccgaccttgccttctcctct
gattcccgcttcattgtctctgcctccgacgacaaaaccctccgcctctgggacgtcaca
actgggtccatcatcaaaacccttcacgggcacaccaattatgtgttttgcgtcagcttt
aacccaaattccagtatgattgtttcgggttcttttgacgagactgttagaatttgggat
gtgaagagtggaaagtgtttgaaggtgttgcctgcccattctgatccagttacatgtgtt
gattttaatagagatggttcgcttattgtgaccagcagttatgatggcttgtgtaggatc
tgggattctgggactggtcattgtatcaagactttgattgatgatgaaaatccacccgtt
tcctttgttaagttctcgcctaatggaaattttattcttgttggcactttggataacaat
ttgaggctttggaatttttcaactgggaaatttctgaagacatacactgggcatgccaat
acaaaatactgtatttcgcccgccttttccataacaaatggaatgtacattgttggcggt
tctgaggataattttatatacttgtgggagcttcaaagcaggaaaatagtacagaaattg
gaaggtcacactgatacagttatatcagtagcatgccatcctacccagaacatgatcgca
tccggtgcaataggcagtgacaagactgtgaagatctggactcaggaaaaatga

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