Populus alba (white poplar): 118063352
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Entry
118063352 CDS
T07314
Name
(RefSeq) SWI/SNF complex component SNF12 homolog isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
palz
Populus alba (white poplar)
Pathway
palz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118063352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palz03021
]
118063352
03036 Chromosome and associated proteins [BR:
palz03036
]
118063352
Transcription machinery [BR:
palz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118063352
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118063352
PBAF complex
118063352
GBAF(ncBAF) complex
118063352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
ANIS5_cation-bd
YEATS
Motif
Other DBs
NCBI-GeneID:
118063352
NCBI-ProteinID:
XP_034933269
LinkDB
All DBs
Position
1:complement(36904507..36907596)
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AA seq
556 aa
AA seq
DB search
MSMNNSNNNNNNNPPKSLGQSSSPFGNSGMVNPSMGANPTFPQQAQMGAGFQGGQFQLSQ
AQATLQAHLKAQQAHAQAQAAHAAQVQAAHAQFQAQLQAQGVSLNQNQSAGIGNLGSSSP
SFSTPGNASAKRLPQKPLGRPPGVPMSSMVSPLKPMDLSSAARRKKQKLPEKQLQDRVAA
ILPESALYTQLLEFETRVDAALARKKVDIQEALKSPPCVQKTLRIYVFNTFSNQIRTIPK
KPNADPPTWTLKVIGRILEDGVDPDQPGAVQKSNPLYPKFSSFFKRVTIQLDQRLYPDNH
IIVWEHARSPAPHEGFEVKRKGDKEFSVNIRLEMNYVPEKYKLSPALMEVLGIEVETRPR
IIAAIWHYVKARKLQNPEDPSFFNCDAPLQKVFGESKMKFTMVSQRISQHLSPPQPIHLE
HKIKLSGNSPAGTVCYDVVVDVPFPIQRELSALLANAEKNKEIDTCDEAICTAIRKIHEH
RRRRAFFLGFSQSPVEFVNALIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIR
YLNRKPAAGSDAPRSM
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaacaacagcaacaacaacaacaataataacccgccaaagagtttggggcaa
tcttcgtcaccatttgggaattcagggatggtcaatccatcgatgggtgcgaacccaaca
ttcccacaacaagcgcagatgggtgctggctttcagggtggtcagttccagctgtcccaa
gcacaggctactttgcaagcccatttgaaagcgcagcaggctcatgctcaagcacaagca
gctcacgctgctcaagttcaagcagctcatgcacaattccaagctcaattacaagcgcaa
ggggtttctcttaaccaaaatcagagtgctggaataggcaatttgggttcatcttcaccg
tcgttctcgactcctggcaatgctagtgcaaaacggctccctcagaaacctctgggtaga
cctcctggtgttcccatgtcgagcatggtttcaccattgaaacccatggatctttcttct
gctgcacgtaggaagaagcagaagctaccagagaagcagctacaagatagagtagcagca
attctgcctgagtctgctctgtacacccagcttcttgagtttgaaacccgtgttgatgct
gctttagctagaaagaaggttgacatccaggaggcgcttaaaagccctccttgtgttcag
aaaacccttcgaatttatgtcttcaatacattttccaatcagataagaacaatccccaag
aagccaaatgctgaccctccgacttggactcttaaagttatcgggagaatcttggaagat
ggggtagaccctgaccagcctggagcagtccagaaatcaaacccgttgtacccaaagttc
tcatcttttttcaagagagtgacaattcagttggatcagagactatatcctgataatcat
atcattgtatgggagcatgctcgatcacctgcacctcacgagggttttgaagtcaagaga
aaaggggacaaagagttctctgtgaatatacgattggaaatgaattatgtgcctgagaaa
tataagctctctccagctttgatggaagttcttggtatagaagttgaaacccgtcctaga
ataatagctgcaatttggcattacgtgaaggctaggaaactgcagaaccctgaggaccct
tcgtttttcaattgcgacgcacctcttcagaaagtatttggggaatcaaagatgaagttc
acgatggtttcacagaggatatctcagcatttatctcctccacagccaatacatttggag
cataaaattaagctgtcggggaatagtccagctggaactgtctgctatgatgtggtggtt
gacgtgccattcccaatacagagggagttgtctgctttgttggcaaatgctgagaagaat
aaagagattgatacttgtgatgaggcgatatgtactgctataaggaaaattcatgaacat
cgtcggagacgcgcattcttccttggatttagtcaatcacctgtcgaatttgtcaatgct
ctcattgaatctcaaagcaaggatttgaagctggtagctggagaagctagtagaaatgcc
gagaaagagcgccgctcagatttctttaaccagccatgggttgaagatgctgttattcga
tatttgaaccgcaagcccgctgctggaagcgatgctcctcggagcatgtga
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