Populus alba (white poplar): 118063437
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Entry
118063437 CDS
T07314
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
palz
Populus alba (white poplar)
Pathway
palz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118063437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118063437
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118063437
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
118063437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
TerY_C
zf-C3HC4_2
DUF7567
FAIM1
PHD_4
Motif
Other DBs
NCBI-GeneID:
118063437
NCBI-ProteinID:
XP_034933356
LinkDB
All DBs
Position
2:complement(9435382..9438594)
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AA seq
300 aa
AA seq
DB search
MELDSIECVPSLDLTDEDEIHHHHHLHHFPSVSKPHTTTTTNNNNSNSNSNTVASAIHTT
SVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAE
SLELPCKYMSLGCPEIFPYYSKLKHETLCNFRPYSCPYAGSECAIVGDIPFLVAHLRDDH
KVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRF
MGDEAEARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLYIQRNMALFFSGGR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggaattggatagcattgaatgtgtgccatccttagatttaacagatgaggatgagatc
caccaccaccaccatcttcatcattttccttctgtttcaaagccacacaccaccaccact
accaacaacaacaacagcaacagcaatagtaataccgtggcttcagctatacacactacc
agtgttcatgagctcctcgaatgccctgtttgtaccaattctatgtaccctcctattcat
cagtgccacaatggccacacactctgttcaacctgtaaaacacgagtacaaaatcggtgc
cccacttgtagacaggagctcggtgacattagatgtctagcattggaaaaagtagctgaa
tcacttgagctgccttgcaaatacatgtcacttggatgcccagagatttttccatactac
agtaaactgaaacatgagaccctgtgcaattttaggccatacagctgtccatatgctgga
tcagagtgtgctattgttggggatatcccattccttgtcgctcatctaagagatgatcac
aaggtggacatgcattctgggtgtactttcaaccatcgctatgtcaagtccaatcctcgt
gaagtagaaaatgcaacatggatgttaactgttttccactgttttggccagtatttctgc
ctccattttgaagctttccaactcgggatggctcctgtttacatggcattcctcagattc
atgggtgatgaggcagaggccaggaattacagctacagcctggaggttgggggaaatggt
cggaaactaatttgggaaggcacaccacggagtataagagatagtcacaggaaggtcagg
gacagccatgatggactgtatatacaacgtaacatggcacttttcttctctggaggaaga
tag
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