Populus alba (white poplar): 118063498
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Entry
118063498 CDS
T07314
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
palz
Populus alba (white poplar)
Pathway
palz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118063498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
palz03041
]
118063498
Spliceosome [BR:
palz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
118063498
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
118063498
NCBI-ProteinID:
XP_034933442
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Position
2:9882723..9887094
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AA seq
486 aa
AA seq
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MATLADSFLADLDELSDNDADIVDEDDDVEAGNMEEDVDGDLADIEALNYDDLDSVSKLQ
KTQRFNDIMQKVEDALQKGSDVQDHGMVLEDDPEYQLIVNCNALSVDIENEIVIIHNFIR
DKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDMEGLIPAAIRMVISVTASTTSGK
PLPEEVLQKTIDACNRALALDSAKKKVLDFVETRMGYIAPNLSAIVGSAVAAKLMGMAGG
LTALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEVFQSTPPSLRMRAGRLLAA
KSTLAARVDSTRGDPSGNTGRTLREEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGR
RLRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGNGKLRVSIGQSKLA
AKVAKKFKEKNYGSSGATSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSENGTF
SKIKRT
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcaacactagctgattctttccttgctgaccttgatgagttatccgacaacgatgct
gatattgtcgatgaagatgatgatgtagaggcaggaaacatggaagaggatgtcgatgga
gacttggcagacattgaagctcttaactatgatgatttggacagtgtgtcaaaattgcag
aaaacacaacgatttaatgatataatgcagaaagtggaagatgcacttcagaagggctca
gatgtccaagatcatggaatggtattggaagatgatcctgaatatcagctaatagtgaac
tgcaatgcattgtcagttgacattgagaatgaaattgttatcatacacaattttattcgt
gacaagtaccggctgaaatttccggagcttgaatcacttgtccatcacccaattgattat
gctcgtgttgtgaagaagattggaaacgagatggatttgacccttgttgatatggaaggg
cttatacctgctgctatcagaatggtgatttctgtgacagcatccacaacaagtggcaaa
ccgcttcctgaagaagtccttcaaaagacaattgacgcatgtaatcgagctcttgcactt
gattcagcaaagaagaaggtccttgattttgtagaaactagaatgggttacattgcaccg
aatctttctgctattgttggtagtgctgttgctgctaaacttatggggatggctggtggt
ctcacagccttagccaagatgcctgcctgcaatgttcagcttcttggtgccaagaagaag
aaccttgcaggattttctactgcaacatcccaattccgtgttggttatatagagcaaaca
gaggtgtttcagtccacaccaccttctttgagaatgcgtgctggtcgactattggccgca
aaatcaacacttgctgcacgagtagattctactagaggagatccatcaggaaacactgga
agaacccttagggaagagattcacaagaaaatagagaagtggcaagagcctcctcctgca
aagcaacctaaaccacttccagttcctgattctgaacctaagaaaaagagaggtgggcgg
cgcctaaggaagatgaaagaaagatatgcgataacagacatgaggaagcttgccaatagg
atgcaatttggggtacctgaagagagttctttgggtgatgggctgggggaaggttatggc
atgcttggtcaggctgggaatggcaagctgcgtgtatcaattggtcagagcaaactcgca
gcgaaagttgctaagaagttcaaggagaagaattatggaagcagtggtgctacttctggc
ctcacctcaagtctggcatttactcctgttcaggggattgagctcacaaatccacaagct
catgcgcaccaacttggcagtgggacacaaagcacctatttttctgagaatggaaccttt
tcaaagatcaagaggacctga
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