KEGG   Populus alba (white poplar): 118063556
Entry
118063556         CDS       T07314                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
palz  Populus alba (white poplar)
Pathway
palz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118063556
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:palz03019]
    118063556
   03041 Spliceosome [BR:palz03041]
    118063556
Messenger RNA biogenesis [BR:palz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     118063556
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     118063556
Spliceosome [BR:palz03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    118063556
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8
Other DBs
NCBI-GeneID: 118063556
NCBI-ProteinID: XP_034933503
LinkDB
Position
1:complement(42728560..42735835)
AA seq 442 aa
MQMDPTKKRKLEDNGIVSSTTDLDSPYKLTPQDARKMMERFTPDQLLDILQNAVVRHPDV
LDAVRSIADPDATQRKLFIRGLGWETTTENLRNLFSTYGELEEAVVILDKNTGKSKGYGF
VIYKHVDGALLALKEPSKKIDGRVTVTQLAIAGNSGANNNNNSSANPGVVDVAMRKIYVA
NVPYEMPSDKLLNHFAQYGEIEEGPLGFDKQTGKSKGFALFVYKTAEGAQAALLEPVKMI
EGRQLNCKLAIDGKRGRQPGGGQGPGQDGLQGQVQGGNVHGDGGMGMVLQTGYGAPGGYG
SYGGAFSSGVPPMGGHQQQHHHPAAPLNASLGGPGLGSQGVGGLSGTGGGSYGPPYGGYG
GPGSTGYGGLGGGGAGVGASVGASSSFRLPPSSVGMPTGGYPDPGQYSLSSTNASFPSQH
QGASPAPRVPSGGMYPNLPPYY
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgcagatggatccaacaaagaagcgcaagctcgaagataacggcatcgtatcatccacc
accgacctagactctccttacaaactaacccctcaagacgctcgcaagatgatggaacgc
ttcacgcctgaccagctcctcgatatacttcaaaacgccgtcgtacgccacccagacgtc
cttgatgccgtccgatccatcgcagaccccgacgccacgcaacggaagctctttatccgc
ggccttggctgggaaaccacaacggaaaatctacgaaatctgttctctacttacggagaa
ttagaagaagcggttgtaatccttgataaaaacaccggaaagtcgaaagggtacggtttt
gttatctataagcatgtcgatggtgcgttattggctttgaaagagcctagtaagaaaatt
gatgggcgcgtgactgtcacgcaactggcgatagcagggaattcaggtgccaataacaac
aataattcttccgccaatcctggtgttgttgatgttgcaatgcggaagatctatgtagcg
aatgtgccgtatgaaatgccgtcggataagttgttgaatcattttgcgcagtatggggag
attgaggagggtcctttaggttttgataagcaaacagggaaatcgaaagggtttgcgctt
tttgtttataagacggcagaaggagcgcaggctgctttattagagccggtgaagatgatt
gaagggaggcagttgaattgtaagttagcaattgatgggaaaagagggaggcagcctggt
ggggggcaaggaccagggcaagatggattgcaaggacaggtgcagggtgggaatgttcat
ggagatggtggaatggggatggtgctgcagacagggtatggtgcaccaggtggatatggt
tcttatggtggtgcgttttcgagtggcgtgccgccaatgggtggtcatcagcagcagcac
catcatcctgctgctcctctgaatgcttcactgggtgggcctgggttggggtctcagggg
gtaggtggtttgagtggtactgggggtggtagttatggcccaccttatggtgggtatggt
ggaccaggttctacaggatatggtggattggggggtggtggtgctggcgtcggtgcttct
gttggtgcgtcttcatcgtttaggttgccaccaagttcagttggaatgcctactggtgga
tatccagatcctgggcagtatagtttgtcatcaacaaatgcttcatttccaagtcagcat
cagggagcatctcctgcaccaagggttccatctgggggaatgtatccaaatttgccacct
tactattga

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