Pantoea ananatis LMG 20103: PANA_0689
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Entry
PANA_0689 CDS
T01195
Symbol
rapA
Name
(GenBank) RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pam
Pantoea ananatis LMG 20103
Brite
KEGG Orthology (KO) [BR:
pam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pam03021
]
PANA_0689 (rapA)
Transcription machinery [BR:
pam03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PANA_0689 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ADD75856
UniProt:
D4GJP6
LinkDB
All DBs
Position
complement(800564..803536)
Genome browser
AA seq
990 aa
AA seq
DB search
MKCYCLRMGNTFKNVKNSSKNYMVFTLGQRWISDTESELGLGTVVAIDTRMITLLFPATG
ENRLYARSDSPVTRVIFNPGDTVTSHEGWQMQVDEVRNDNDLITYIGTRLDTEETHVMLR
EVMLDSKLVFSKPQDRLFAGQLDRMDRFALRFRARKYQSEQYRLPVSGLRGMRTNLIPHQ
LHIAHDVGRRHAPRVLLADEVGLGKTIEAGMIIQQQLLAGRAERVLIVVPETLQHQWLVE
MLRRFNLRFALFDDDRYAEAQHDSDNAFDTEQLIICSLDFVRRNKQRLDKLADADWDLMV
VDEAHHLAWSEGEPSREYQVIEKLAEKTPGVLLLTATPEQLGMESHFARLRLLDPDRFHD
FAAFVEEQQHFRPIADAVTSLLADHAISQNEMNMINELVGEQDIEPLLQVANSDREGKQD
ARSELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHAIRLPLPAQYQTAIKVSGIMGTRK
SAEARARDLLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSNRKEKVLVICAQAATALQ
LEQVLREREGIRAAVFHEGLSIIERDRAAAWFASEENGAQVLLCSEIGSEGRNFQFASRL
VMFDLPFNPDLLEQRIGRLDRIGQAHDIQILVPWLEKTAQAVLLRWYHEGLDAFEHTCPT
GRAIYDSVNAELINYLAAPENSDGFDDFISECRKQHDALKFQLEQGRDRLLELNSNGGEA
AQALANTIAEQDNDTELVNFALNLFDIVGINQEDRSDNLIVLTPSDHMLVPDFPGLPEDG
CTITFNRDQALSREDTQFITWEHPLIRNGLDLILSGDTGSCALSLLKNKALPVGTLLVEM
IYVVESQAPKHLQLTRFLPPTPVRLLLDRNGTNLAGKVEFESFNRQLNAVNRHTGSKLVN
AVQQDVHAILTLAEKEVVSEARAVIDAARREASEKLGAELSRLEALKAVNPNIRDDEVEA
LETNRQQVLESLDEANWRLDALRLIVVTHQ
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgctattgcctgagaatggggaacaccttcaaaaacgttaaaaattcgagcaaa
aattatatggtttttacattaggtcagcgttggattagtgatacagaaagtgaactggga
ttaggcaccgtggtggcgattgatacgcgcatgatcaccctgctgttcccggccacaggg
gaaaatcgcctctacgctcgcagcgactcgccggtcacccgcgtgatttttaatccgggt
gataccgttaccagccacgaaggctggcagatgcaggtcgatgaagtacgcaatgacaat
gacctgataacctatatcggcacgcgccttgataccgaagaaacccacgtcatgctgcgt
gaagtgatgctcgacagcaaactggtgttcagcaaacctcaggacaggctgtttgcaggc
cagctcgaccgtatggatcgcttcgccctgcgttttcgcgcacgtaaatatcaaagtgag
cagtatcgcctgcccgtcagcggcctgcgcggcatgcgtaccaatctgatcccccaccag
ctgcatatcgcccacgacgtaggccgccgccatgcgccgcgcgtcctgctcgcggatgag
gtcggcctggggaaaaccatcgaagccggcatgatcatccagcagcagctgttggcaggc
cgtgctgaacgcgtacttatcgtcgtgccagaaaccctgcaacatcagtggctggtagaa
atgctgcgccgcttcaacctgcgcttcgccctgtttgacgacgatcgttacgctgaagcc
cagcacgacagcgacaatgcctttgacaccgaacagttgattatctgctcgctggacttt
gtgcgtcgcaacaaacagcgtctggataagctggcggacgcagactgggatttaatggtg
gtggatgaagcgcaccatttggcctggtccgaaggcgaaccaagccgcgagtatcaggtg
atcgaaaaactggctgaaaaaacgccgggcgtcctgttactgaccgcgacgccagaacag
ctgggcatggagagtcattttgcgcgcctgcgcttgcttgaccccgaccgttttcatgat
tttgccgcctttgttgaagagcagcagcacttccgcccgattgccgatgcggtgacatcg
ctgctggccgatcatgccatctcacaaaacgagatgaatatgatcaatgagctggtcggc
gagcaggatattgaaccgctgctgcaggtggcaaacagcgatcgtgaaggcaaacaggac
gcgcgcagcgaactcatttccatgctgatggatcgccacggtaccagccgcgtgctgttc
cgtaatacccgcaacggggtgaaaggcttcccgaaacgtgagttacacgctattcgtctg
cccctgccggctcagtatcaaacggccattaaggtatccggtattatgggcacacgtaaa
agcgcagaagcgcgcgcgcgcgatctgctctatccggaacagatttatcaggagttcgaa
ggcgataccggcacctggtggaacttcgatccgcgcgttgaatggctcatgggttacctg
accagcaaccgtaaagaaaaagtgctggtgatctgtgctcaggccgctacagcacttcaa
ctggagcaggtgctgcgtgaacgtgaagggattcgcgccgccgtgttccatgaagggctg
tcgatcattgaacgcgatcgggctgccgcctggttcgcttctgaagagaacggcgcacaa
gttctgctgtgttccgaaattggttccgaaggccgtaacttccagttcgccagccgtctg
gtgatgttcgatctgccgtttaacccggatctgctggaacagcgtattggccgactggat
cgtattggccaggcgcacgatattcagattctggtcccctggctggagaaaacggcccag
gccgtgctgctgcgctggtatcacgaagggctggacgcgttcgagcacacctgcccgacc
ggcagagccatctacgacagcgtcaacgcagagctgattaactacctggccgcaccggaa
aacagcgacgggtttgatgatttcattagcgaatgccgtaagcagcatgatgcgctgaaa
ttccaactcgaacagggccgcgaccgcctgctggagctaaactctaacggtggtgaagcc
gcccaggcgctggccaatactattgccgaacaggataatgataccgaactggttaacttt
gctcttaacctgtttgatatcgtcggcattaatcaggaagaccgcagtgataacctgatc
gtgctgacaccttcagatcatatgctggttccggactttcctggcctgccggaagacggc
tgtacgatcaccttcaatcgcgatcaggccctgtcgcgtgaagatacgcagtttattacc
tgggaacatccgttaatccgtaatggcctggatctgattctgtcaggtgacaccggcagt
tgtgcgctgtcgctgttaaagaacaaggcattgcctgtgggaacactgctggtcgagatg
atctacgtggtggaatcccaggcaccgaaacatctgcagctaacccgcttcctgccccct
acgccggtgcgcctgctgctggatcgcaacgggacgaacctggccggtaaagtggaattc
gaaagcttcaaccgccagttgaatgccgttaaccgccacaccggaagtaagctggtgaat
gccgtacagcaggacgttcacgcgatcctgacgctggctgaaaaagaagtcgtcagtgaa
gcacgtgccgttattgacgcggcacggcgcgaggcgagcgaaaagctgggggccgagtta
tcacgtctggaagcactgaaagccgttaaccccaacatccgtgacgatgaggtcgaggcg
ctggaaacgaatcgccagcaggtactggagagtctggatgaagcgaactggcgactggat
gcactgcgtctgattgtggttacgcatcaataa
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