Pantoea ananatis LMG 20103: PANA_0768
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Entry
PANA_0768 CDS
T01195
Symbol
pcnB
Name
(GenBank) PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pam
Pantoea ananatis LMG 20103
Pathway
pam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PANA_0768 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pam03019
]
PANA_0768 (pcnB)
Enzymes [BR:
pam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PANA_0768 (pcnB)
Messenger RNA biogenesis [BR:
pam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PANA_0768 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
TOR1L1_N
Motif
Other DBs
NCBI-ProteinID:
ADD75935
UniProt:
D4GKA6
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All DBs
Position
complement(897266..898705)
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AA seq
479 aa
AA seq
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MSLSRCPIFTRVANFCRKVLKRDDEEAPAEVEPESHMTIIPRESHTISRKDISENALKVL
YRLNKAGYEAYLVGGGVRDLLLGQKPKDFDVTTNATPEQMRKLFRNCRLVGRRFRLAHVM
FGPEVIEVATFRGHHQIEETSDDHNNSQRAQSGMLLRDNIFGSIEDDAQRRDLTINSLYY
SVADFSVRDYVGGLNDLQQGIIRLIGDPETRYREDPVRMLRVARFAAKLNMRIAPETAEP
IPRLASLLRDVPAARLFEESLKLLQAGYGYSTWLKLCEYQLFQPLFPTLARNFTENGDSH
MERMLAQVLKNTDNRIQNDMRVNPAFLFAAMFWYPQLEAAERIAQESGLTYYDAFALAMN
DTLDEACRALAIPKRITSLIRDIWQLQLRMSRRHGKRAWKLMEHPKFRAAYDLLSLRAEV
ENNPELLRLSKWWGEFQVAAPPQQKTMLNTLGDDPAPRSRTRRPRRRSTAPRRDNNNAS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
ttgtcactgtcgaggtgtcccatttttacccgagtcgctaatttttgccggaaagtcctg
aagcgtgatgacgaggaagcaccagcagaggttgaacctgagagtcatatgaccatcatt
cctcgtgaaagccacaccatctcacgtaaagacatcagcgaaaatgccctcaaggtgctg
tatcgtctgaataaagccggttatgaagcctatcttgttggcggcggcgtgcgcgatttg
ctgctgggacagaagcctaaagacttcgacgtgaccacaaacgccacgccggagcagatg
cgtaaactgttccgcaactgccgtctggttggccgccgcttccgtctggcgcacgtgatg
tttgggccggaagtgatcgaagtggcgacattccgcggtcatcatcagattgaagagacc
agcgacgatcataacaattctcagcgtgcccagagcggtatgctgctgcgcgacaatatt
ttcggcagcatcgaagatgatgctcagcgtcgcgatctgacgatcaacagcctctattac
agcgtggccgatttttcggtgcgggattatgttggtggtctgaacgatctgcagcaaggg
attattcgcttgattggcgatccggaaacccgttatcgcgaagatcctgtgcgcatgctg
cgcgttgcgcgtttcgctgccaaattaaatatgcgtattgcgcctgaaacggctgagccg
attccccgtctggcatcgttacttcgtgacgtgcccgccgcgcgtctgtttgaagagtcg
ctaaaactgctgcaggccggctatggttacagtacctggcttaagctgtgtgaataccag
ttatttcagccgctgttccccacgctggcccgtaactttaccgagaacggcgacagccac
atggagcgcatgctggcccaggtgctgaagaacacggataaccgtattcaaaatgatatg
cgggttaatccggccttcctgttcgccgcgatgttctggtatccacagctcgaagcggct
gaacgcattgcgcaggaaagtggcctgacctattacgatgcctttgccctggccatgaac
gatacgctggacgaagcctgccgtgcgttagccattcctaagcgcatcacatcgttgatt
cgcgacatctggcagttgcagctacgcatgtctcgtcgccacggtaagcgggcctggaag
ctgatggagcatcctaagttccgtgctgcttacgacctgctctcgctacgagcggaggta
gaaaacaatccggaactgctgcgcctgagtaagtggtggggagagttccaggttgccgcg
ccgccacagcagaaaacgatgctgaataccctgggagacgatccggccccgcgcagccgt
acgcgccgccctcgtcgccgttcaacggctccgcgtcgtgataacaacaacgcctcatga
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