Pantoea ananatis LMG 20103: PANA_1122
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Entry
PANA_1122 CDS
T01195
Symbol
rlpA
Name
(GenBank) RlpA
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pam
Pantoea ananatis LMG 20103
Brite
KEGG Orthology (KO) [BR:
pam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pam01011
]
PANA_1122 (rlpA)
Enzymes [BR:
pam01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PANA_1122 (rlpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pam01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PANA_1122 (rlpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
DUF6491
Motif
Other DBs
NCBI-ProteinID:
ADD76289
UniProt:
D4GM19
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All DBs
Position
complement(1280204..1281385)
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AA seq
393 aa
AA seq
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MFKRSQMRKDWLGVVLASMVLAACSTQEPQQQSAPPQPAYNGPVVEIPGVEPRYEPVNPS
TNQDYSVNGKNYRIIKNPANYSEVGLAAWYGEEAQGNRTATGETFDPDALTAAHPTLPLP
SYVRVTNLANGRQIVVRVNDRGPYTPGRIIDLSRAAGDRLNISNNSRVRVDYISVAPDGT
LSGPGTIGTVVAKQSYALPARPDLNGPVMSSPQGMSGGSQPIMNGSSQPQTAPAAEPEAQ
DISPISNATLQSNNAMGAPVQSSGFLGAPQPLPSGVLESSEPAASPPVAAAPVAAAPVAA
SAAASPRQPAASQSASSLSGYVVQVSAINDAARARQLVNSLRQRFGVPGAVENAGNVYRV
QLGGYKTRAEAVALQQRLSSEGQSAAFVTTAGR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaagaggtcgcagatgcgtaaggactggcttggcgttgtattggcttcaatggtt
ttagctgcatgttctacccaggaaccgcaacaacaaagtgcgccaccccagcctgcctat
aacggcccggtggtagagattcctggcgttgagcctcgttatgagccggtcaatccgtcg
accaatcaggactacagcgtcaacggtaaaaactaccgtatcatcaaaaatccggccaac
tacagtgaagtggggctggccgcctggtacggtgaggaagcccagggtaatcgtactgcg
acgggcgagacctttgatcccgatgccctgacggctgcccatccaacgctgcccctgccc
agctacgttcgcgtgacaaacctggcaaacggccgccagattgtggtgcgggttaacgat
cgcggcccgtatacgccgggacgcattatcgatctgtcccgtgcggcaggtgaccgcctg
aatatctccaacaattcccgcgtgcgggttgattacatcagtgtcgcaccggatggcacg
ctttccggccccggcaccatcggcaccgtcgtggcaaaacagagctatgccctgcctgcg
cgtcccgacctgaacggtccggtcatgagcagcccacaaggcatgagcggtggcagtcaa
cccatcatgaacggtagcagccagccgcagaccgccccggcggctgaacccgaggctcag
gatatttcacccatcagcaatgcgacgctgcaaagcaataatgctatgggcgcgccagtg
caaagtagcggcttcctgggcgcgccgcagccgttacccagcggcgtgctggaaagcagt
gagcccgctgccagcccccctgtcgcagccgcgcctgttgccgctgcgccggttgcggcc
agtgccgccgcatcaccccgccagcccgccgccagccagagtgcctcatccctttcaggc
tatgtcgttcaggtgagtgccattaatgatgcagcacgtgcccggcagttagttaacagt
ttacgccagcgctttggcgttcctggcgctgtggaaaacgcaggcaatgtgtaccgcgtg
cagcttggtggttataaaacccgtgcagaagccgtggccttacagcaacggctgagcagc
gaaggccagagtgcggccttcgttaccaccgcaggtcgttaa
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