Pantoea ananatis LMG 20103: PANA_1367
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Entry
PANA_1367 CDS
T01195
Symbol
ycbB
Name
(GenBank) YcbB
KO
K21470
L,D-transpeptidase YcbB
Organism
pam
Pantoea ananatis LMG 20103
Brite
KEGG Orthology (KO) [BR:
pam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pam01002
]
PANA_1367 (ycbB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pam01011
]
PANA_1367 (ycbB)
Peptidases and inhibitors [BR:
pam01002
]
Cysteine peptidases
Family C82
PANA_1367 (ycbB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pam01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PANA_1367 (ycbB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
POTRA
Motif
Other DBs
NCBI-ProteinID:
ADD76534
UniProt:
D4GNI3
LinkDB
All DBs
Position
1549068..1550930
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AA seq
620 aa
AA seq
DB search
MFPDRLRGRSMKGAGMLLYKRFKIHQVSSWLTLALTLIPCAMAQAAIIAAMPGTHAAYAT
TSVSESQQKIRQAFSGDSQPFYGASLAALYAARNMQPIWQDHEAVQKFQQQLAEVALSGV
QPQFTRWVDRLTDPDITGFARDVTLSDAMLGYLQFVSSVPAQGEIWLYSTTPYKLAVPSV
SVINAWQNAVNAGSSAAFVNSLVPQHPQYPLMHKALKSLLEDKQPWPQIKNRDTLRPGQV
SDDVPALREILRRSGMLSAQVTAPAPNEDVVPTALVAVSHSEQPVAVSPSAVTVNDIPAA
APGVQGNVQNAPAAPGSVNVYNDELVAAVKRFQQWQGLDADGAIGLRTREWLNVSPQQRA
ALLALNIQRLRLLPDDMHNGIMVNIPNYSLNYYNNGTKVLSSRVIVGRPDRKTPLMRSAL
NNVVLNPPWNVPTNLVRQDIIPKVKQDPTYLYKHGYTLLSGWSADSEVIDPSMIDWSMVS
ASSFPYRIRQAPGQTNSLGRYKFNMPSSDAIYLHDTPNHNLFQRDIRALSSGCVRVNKAS
ELAGILLQDVGWNDARISDTLKQGDTRYVPIRHRIPVNLYYLTAWVADDGKTQFRTDIYN
YDNTARSASQVLSRAQQLLL
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
ttgtttcctgacaggctgcgcggtagatcaatgaagggggcagggatgttactgtataaa
cgcttcaaaattcatcaggttagttcgtggctgacgctagcgctcacgctcattccctgt
gcaatggctcaggctgcgatcatcgccgcgatgcccggtacgcacgcggcgtacgccacc
acatccgtcagtgagagtcagcagaagattcgccaggcgttttcaggcgacagccagcct
ttttacggtgcttctctggccgcgctctacgccgcgcgtaacatgcagccgatctggcag
gatcatgaagccgtacagaaatttcagcagcagctggcggaggttgccctctccggcgtg
cagccgcagtttacccgctgggtcgatcgcctgaccgatcctgacatcacaggctttgcc
cgtgatgtcacgttgtctgatgcgatgctgggctatttgcagtttgtctcctcggtgcct
gctcagggagaaatctggctgtacagcaccacgccctacaagctggctgtgccttctgta
tccgtgatcaatgcctggcaaaatgccgtcaatgcgggcagttcggcggcgtttgttaat
tcactggtgccgcagcatccgcagtatccactcatgcataaggccctgaaaagcctgctt
gaagataaacaaccctggccacaaattaaaaatcgcgacacgttacggcctggacaggtc
agtgacgatgtgccggcgttgcgggaaattcttcgccgcagcggcatgctgagtgcacag
gtaaccgcacccgcgcccaatgaggatgtcgttcccaccgcactcgttgccgtcagccac
agcgagcagcctgtcgccgtcagcccttcggccgtcacggttaacgatatacctgctgcg
gcacccggtgttcagggtaacgtccagaatgctcccgctgcgcccggcagtgtgaatgtt
tataacgatgagctggtcgcggcggtaaaacgctttcaacagtggcaggggctggacgcc
gatggggcgattggcctacgtacacgggaatggctgaatgtctctcctcaacagcgtgcg
gccttgctggcgctgaatatccagcggctgcgtttgctgccggatgatatgcataacggc
attatggtgaacatccccaactattcgctgaattattacaacaacggcactaaagtgctg
tcctcccgggtcatcgtgggacgaccagatcgtaaaacgccgttgatgcgaagcgcacta
aataatgtggtgttgaatccgccctggaatgtgccgaccaatctggtgcgtcaggacatt
attcctaaggtaaaacaggacccaacctatctgtataaacatggatacacgctgctgtct
ggctggagcgccgattccgaagtcatcgatcccagcatgattgactggagcatggtgtca
gcctcatccttcccttaccgcatacgtcaggcaccggggcaaaccaattcactcggtcgc
tataagtttaatatgccaagctcggatgcgatttatctgcatgacacgccgaaccacaat
ctgtttcagcgcgatattcgtgcgctcagctcgggctgcgtgcgcgtgaataaagcttca
gaactggccggtattctgttgcaggatgtcggctggaatgacgcgcgtatctctgacacg
ctcaagcagggcgatacgcgctatgtacccattcggcatcgcatcccggttaacttgtat
tatttaacggcctgggttgcggatgacggcaaaacgcagttccgtacagatatttacaat
tatgataatacggcgcgttcggcgagccaggtcttaagccgtgcacagcagttattactc
taa
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