Pantoea ananatis LMG 20103: PANA_1412
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Entry
PANA_1412 CDS
T01195
Symbol
ycdC
Name
(GenBank) YcdC
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
pam
Pantoea ananatis LMG 20103
Brite
KEGG Orthology (KO) [BR:
pam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pam03000
]
PANA_1412 (ycdC)
Transcription factors [BR:
pam03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
PANA_1412 (ycdC)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
Motif
Other DBs
NCBI-ProteinID:
ADD76579
UniProt:
D4GBX6
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Position
1601098..1601754
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AA seq
218 aa
AA seq
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MSGEGNPMKKEQSVPTRRSVAVAAKRAAILEAALSFFSQFGIHGTRLEKVADRAGVSKTN
LLYYYPSKEALYIAVLKEILDVWLAPLRALSHDQDPLRAIRHYIRLKLEVSRDHPQASRL
FCLEMLQGAPLLKGELAGDLKQLMDDKTAIIQRWIAEGRLAGIQPQHLIFMLWATTQHYA
DFASQVEAITGNRLTNPLFFEETVENVQRIIIEGIRVR
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaggcgaggggaaccctatgaaaaaggaacaatcagtgcccacgcgccgctcagtg
gccgtcgctgccaaacgggcggctattctggaggccgcgctgagctttttttcccagttt
ggcatccacggtacgcggctggaaaaagtcgctgaccgcgccggtgtctctaaaacgaat
ttgctgtactactatccttccaaagaagcgctctatattgctgtgttgaaagagatcctg
gatgtctggctggcgcccctgcgtgcactgagccacgatcaggatcctttgagagccatt
cggcactatatccgcctaaaacttgaagtctcgcgggaccatccgcaggcatcaaggctg
ttttgcctggaaatgctccagggggcgcccctgttgaaaggtgaactggcgggggattta
aaacaacttatggatgataaaacagcgattatacagcgctggatagccgaaggacggctg
gcgggtattcagccccaacacctgatttttatgctctgggcaaccacgcagcactacgcc
gattttgccagtcaggttgaagccattacgggaaacaggctcactaatccgctgtttttt
gaagaaacggtagagaacgttcagcgcattattattgaaggtattcgggtgcgttaa
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