Pantoea ananatis LMG 20103: PANA_1489
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Entry
PANA_1489 CDS
T01195
Symbol
holB
Name
(GenBank) HolB
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pam
Pantoea ananatis LMG 20103
Pathway
pam03030
DNA replication
pam03430
Mismatch repair
pam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PANA_1489 (holB)
03430 Mismatch repair
PANA_1489 (holB)
03440 Homologous recombination
PANA_1489 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pam03032
]
PANA_1489 (holB)
03400 DNA repair and recombination proteins [BR:
pam03400
]
PANA_1489 (holB)
Enzymes [BR:
pam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PANA_1489 (holB)
DNA replication proteins [BR:
pam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PANA_1489 (holB)
DNA repair and recombination proteins [BR:
pam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PANA_1489 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol3-delta_C
DNA_pol3_delta2
HolB_lid
Cytochrom_C
Motif
Other DBs
NCBI-ProteinID:
ADD76656
UniProt:
D4GC53
LinkDB
All DBs
Position
1675775..1676764
Genome browser
AA seq
329 aa
AA seq
DB search
MNWYPWLNQPYRQVIGQHQDGRAHHALLITSLDGMGDDALVWGISRWLMCLQRDGLKSCG
HCHGCQLMQANTHPDWYRLEAEKGKTTLGIDAVRQVTEKMYHYAQQGGAKVVWLPDAAQL
SEAAANALLKTLEEPPANSWFFLSCREPSRLLATLRSRCMVLTLPPPDENHSLAWLRKQG
QHDEAPLLAALRLSAGAPGAALTLLDDGLWQARQKLCDSLPGALQQDILQLLPVLNADNS
AARIGWLLSFILDAMKWQQGATQWLTNVDRQDVVAMLAQHFSQTALNNSAQDWMRCRESL
LQVAAVNRELLLTDRLLSWADNLKPRLPG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaactggtatccctggctcaatcaaccttaccgccaggtgattggtcagcatcaggat
ggccgtgcccatcatgcgttgttgatcacctctcttgacggcatgggcgatgatgcgctg
gtgtgggggatcagccgctggctgatgtgcctgcaacgcgacggattaaaaagctgtggt
cactgccatggctgccagctgatgcaggcaaatacgcaccctgactggtaccggcttgaa
gccgaaaaaggcaaaacgacgctgggcattgatgccgtgcgtcaggttacggaaaaaatg
tatcactatgcgcagcagggcggtgccaaggtagtctggctgccagatgcggctcagctc
agcgaggcggcggctaacgccttactgaaaacgctggaagagccgccagccaacagttgg
ttctttttaagctgtcgcgagccctcccgcctgctggcaacgctgcgtagtcgctgcatg
gtgctgacgttacctccaccagatgaaaatcacagtctggcctggctaagaaagcagggg
caacatgatgaggccccgctactggccgcgctgcggctcagtgcaggtgcgcccggtgcg
gcgctgacgctgttggatgatggcctgtggcaagcccggcaaaaactgtgcgattccctg
ccgggtgcgttgcaacaggacattctgcaactcctgcccgtgctgaacgcagataacagc
gcggcacggattggctggctgttatcattcatactggatgcgatgaaatggcagcagggc
gcaacccagtggctgactaacgtcgatcgtcaggacgtggtcgccatgctggcgcagcac
ttctcgcaaacggcgctcaataacagcgctcaagactggatgcgctgccgtgaatcgtta
ttacaggttgcggcagtgaatcgtgaactcctcctgactgacagattactgagttgggca
gataacctgaagcccaggttacccggctaa
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