Pantoea ananatis LMG 20103: PANA_2683
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Entry
PANA_2683 CDS
T01195
Symbol
yfcK
Name
(GenBank) YfcK
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
pam
Pantoea ananatis LMG 20103
Brite
KEGG Orthology (KO) [BR:
pam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pam03016
]
PANA_2683 (yfcK)
Enzymes [BR:
pam01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
PANA_2683 (yfcK)
Transfer RNA biogenesis [BR:
pam03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
PANA_2683 (yfcK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_9
NAD_binding_8
Pyr_redox_2
ThiI
Glyco_transf_4
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
ADD77850
UniProt:
D4GJA0
LinkDB
All DBs
Position
3020908..3022920
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AA seq
670 aa
AA seq
DB search
MKTPQVEHARLSWNEQGTPVSRAFDDVYFSNDNGLEETRYVFLGGNDFPQRFHQHPRDLL
IVAESGFGTGLNFLTLWQAFDSFQQHYPDAPLKRLHFISFEKFPLTQADLTAAHQHWPEL
APWAEQLQHQWPLALPGCQRVLFDSGRVTLDLWLGDINALIDNFDDSLHRQVDAWFLDGF
APSKNPDMWTPELFASMAKLARPGGTFATFTAAGFVRRGLQQAGFAVTRRKGFGPKREML
CGSLEAAPALTHRQPWYARPALSGKEIALVGGGIASATLALALLRRGFRVTLYCADEAPA
LGASSNRQGALYPLLNEHDPALAAFFPAAFSFARRLYDQLDLPYEHDWSGVLQLGWDEKS
ASKIAQMLDMALPAEVAFGVNQDEAAVLANVALDCGGIFYPLGGWLAPAELTTALLSHCE
QRGLRIHWLHRVTALTQVPQGWQLTFNEKPSTQHQAVVLANGHAMTDLPQTDALPVYPVA
GQVSHIPASPALSALKTVLCYDGYLTPASPQFSTHCIGASYHRGDTSTAYREDDQQQNRS
RLQHCLPHSDWVNDVDVSEGEARNGVRCATRDHLPMVGSVPDYVATLDVYADLAQQRARE
AKSEMAPCFPGLYLFGALGSRGLCSAPLAAEVLAAQLSGEPQPLDLNTLAALHPNRYWVR
KLLKGKKAGK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaacaccccaggttgaacacgccagactgagctggaacgaacagggtacacctgtt
tcccgagcgtttgacgacgtctatttttccaatgacaacggtctggaagagacacgttat
gtctttctgggtggcaatgatttcccacaacgctttcatcagcacccgcgcgatctgctc
attgttgccgaaagcgggtttggcacaggcctgaactttcttacgctctggcaggccttt
gattccttccagcaacattatcctgacgcgcccctaaaacgtctgcacttcatcagtttt
gaaaaattccccctgacgcaggccgatttaacggcggcccaccagcactggcccgaactg
gccccctgggccgaacagctccagcaccagtggccgctggcactgccaggctgccagcgg
gtgttatttgattcgggccgcgtcacactggacctgtggttaggcgatattaatgcgcta
attgataattttgatgacagtctgcatcgccaggtggatgcctggtttctggatggcttt
gcgccgtcgaaaaatcccgatatgtggacgccggaactgtttgcgtcgatggcgaaactg
gcccggccagggggcacatttgcgacctttacagcagcgggttttgtgcggcgcgggttg
caacaggcgggctttgcggtgacccggcgtaaaggctttgggccgaaacgggaaatgctg
tgcggttcgcttgaggccgcgcctgcgctgactcatcgccagccctggtatgcgcgccct
gccctgtccggtaaggagatcgccctggtcggcggcggcattgccagcgcgacgctggcc
cttgccttacttcgccggggctttcgcgtgacgctctactgcgctgacgaggcacccgcg
ctgggggcgtccagtaatcgtcagggcgcgctctatccgctccttaacgagcacgatcct
gccctggcggctttctttcctgccgcattcagttttgcccgtcgcctgtatgatcaactc
gatctgccttatgaacatgactggagcggcgtattgcagttgggctgggacgagaaaagt
gccagtaagattgcgcagatgctggatatggccctaccggctgaggtcgcctttggcgtc
aaccaggacgaggcagccgtgttggcaaatgtggcgctggattgcggcggtatcttttat
ccactgggcggctggctggccccggccgaattaaccacagccttgttgtcccactgcgag
cagcgtggattacgcattcactggctgcaccgcgtcaccgcactgacgcaggttccgcaa
ggctggcagttaacctttaacgaaaagccctcaacccagcatcaggctgtggtgctggct
aatggtcatgccatgaccgatctgcctcagaccgatgccctgccggtttacccggtcgcc
ggtcaggtcagccatatcccggcttcaccggccctgtcggcactgaaaacggtactttgc
tatgacggctacctcacgccagccagcccgcagtttagtacgcactgtatcggggccagc
tatcatcgtggcgacacctcaaccgcctatcgcgaagacgatcagcagcaaaaccgcagc
cgtctgcagcactgcctgccacacagcgactgggtgaatgacgtggacgtcagtgagggc
gaggcgcgcaatggcgtgcgctgcgccacacgcgatcatttgcccatggtcggcagcgtg
ccggattacgtggcaacgcttgacgtttatgccgatcttgctcagcagcgcgcccgcgag
gctaagagcgaaatggcgccctgtttccctggcctttatctgtttggtgcgcttggctca
cgcgggctgtgcagcgcccccctggcggcggaagtgctggcggctcagcttagcggtgaa
ccccagccgctggacctcaacacgctcgcggcgcttcatcccaatcgttactgggtaaga
aaactactgaagggtaaaaaagcggggaaatag
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