Pantoea ananatis LMG 20103: PANA_2884
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Entry
PANA_2884 CDS
T01195
Symbol
yfhD
Name
(GenBank) YfhD
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
pam
Pantoea ananatis LMG 20103
Brite
KEGG Orthology (KO) [BR:
pam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pam01011
]
PANA_2884 (yfhD)
Enzymes [BR:
pam01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PANA_2884 (yfhD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pam01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PANA_2884 (yfhD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
LysR_substrate
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
ADD78051
UniProt:
D4GKL2
LinkDB
All DBs
Position
3249695..3251176
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AA seq
493 aa
AA seq
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MEPSRDNYLKRLKFNYLVIGLLTVLLALALWPSIPWYGGGQDTISQIKSRGVLRVSTVNS
PLTYYTVNKAPAGMDYELAKRFADYLGVKLDITVRANLSDLFDALDDGKADLLAAGLIYN
DERLSRYQIGPGYYSVSQQLVYRVDKPRPKNLGDLKGRLVVASGSAYLSTLKNARANHYP
DLDWAISTDQSPKALLEAVAEGKLDYTIGDSVTIALLQRIHPQLAVAFDVTDEEPVTWYL
PHESDDSLNAAMLDFFNSMGEEGAMARLEEKYLGHVGTFDYVDTRTFLRSIDNVLPDIKP
LFEKYAKNIDWRLLAAISYQESHWNPQATSPTGVRGMMMLTRNTADSVDVGDRTDPEQSI
RGGSEYLQNMMEKVPQTIPEDERIWFALAAYNMGYAHMLDVRKLTAKQGGNPDSWADVKL
RLPMLSQKRYYSQTTYGYARGQEAYNYVENIRKYEISLVGYLQEQEKRIAQQAALEAELG
KGYPAVTPEVAMN
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
ttggagccatcgagagataactatttgaaacgcctaaaatttaattatctggttatcggt
ctgcttaccgtgctgctggctctggcactgtggccgtctattccctggtacgggggagga
caagatacgatttcacagattaaatcacggggagtgctacgcgtcagtaccgtaaactcg
ccgttgacttactacaccgtgaataaagcaccggccgggatggactacgagctggcgaag
cgttttgccgattatctgggcgttaagcttgatataacggtgcgcgccaacctcagcgat
ctgttcgatgcgctcgacgacggcaaagcggatctgctggcggcaggtctgatttataac
gatgagcgtttgtcgcgttatcagatcggtccgggctactacagcgtttcgcagcagctg
gtctatcgcgtggacaaaccgcggccaaaaaacctgggtgacttaaaggggcggctggtt
gttgcctctggatcggcttatctgtcgacgcttaaaaacgcccgggcgaatcactatccc
gatctcgactgggccatttcgaccgatcaaagtccgaaagccctgctggaagccgtggct
gagggcaagctggattatacgattggcgattccgtgacgattgccctgcttcagcgcatt
catccccaactggctgtggctttcgacgtcaccgatgaagaaccggtaacgtggtattta
ccgcacgaaagcgatgacagcctgaacgccgccatgctggatttctttaacagcatggga
gaagaaggggcgatggcaagacttgaagagaaatatctcggtcacgtcggcaccttcgac
tacgtggatacccgcaccttcctgcgctccattgataacgtgctgcccgatataaaaccc
ctgtttgaaaagtacgccaaaaatatcgactggcggctgctggcggcgatctcctatcag
gagtcgcactggaatccgcaggcgacgtcgcctaccggcgtccgcggcatgatgatgtta
acgcggaataccgctgacagcgttgacgtaggtgaccgtaccgatcctgagcagagcatc
cgtggcggcagcgagtatctgcaaaacatgatggaaaaggtgccacaaacgattccggaa
gatgagcgtatctggtttgccctggcggcctataacatgggctatgcgcatatgctggat
gtgcgtaagctcacggctaaacagggtggaaatcccgacagctgggcagatgttaaactg
cggctccccatgttgagccagaagcgctactactcacaaaccacctatggctatgcacgc
gggcaggaagcctataattacgtggagaatatccgcaaatatgaaattagcctggtgggc
tatttgcaggagcaggaaaaacgcattgcccaacaggcggccctggaggcagagctgggc
aaaggttatcctgccgtcacgcctgaggtggcaatgaattaa
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