Pantoea ananatis LMG 20103: PANA_2902
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Entry
PANA_2902 CDS
T01195
Symbol
srmB
Name
(GenBank) SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pam
Pantoea ananatis LMG 20103
Brite
KEGG Orthology (KO) [BR:
pam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pam03009
]
PANA_2902 (srmB)
Enzymes [BR:
pam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PANA_2902 (srmB)
Ribosome biogenesis [BR:
pam03009
]
Prokaryotic type
rRNA helicases
PANA_2902 (srmB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
WSD
Motif
Other DBs
NCBI-ProteinID:
ADD78069
UniProt:
D4GKN0
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All DBs
Position
3266244..3267572
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AA seq
442 aa
AA seq
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MTVTTFSELELDESLLEALQEKGYTRPTAIQAAAIPPRWRAATFWVRHLPGPGKPPHIYY
RCCSTCSIFRARSLARRVFLILTPTRELAMQVADQARELAKHTHLDIATITGGVAFMNHA
EVFSENQDVVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETIAGETRW
RKQTMLFSATLEGEHIKDFAERLLNEPVELEADPSRRERKKIQQWYHRADDLEHKTKLLV
HLLKQPEVTRSIVFVRKRERLHELVSWLHDAGIRTSYLEGEMVQAKRNEAIKRLVEGRVN
VLVATDIAARGIDVDDVSHVINFDMPRTADTYLHRIGRTGRAGRKGIAISLVEAHDHLLL
GKVSRYVDEPIKARVIDELRPVTRAPSAKTTGKPSKKALAKRAEKKAKEEEKPRVKKRHR
DLKNVGKRRKPSGSTPGSESAE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtaaccacattttccgaacttgaactcgacgaaagcctgcttgaagcgctgcag
gagaaaggctatacgcgcccgacagcaattcaggctgctgccattcccccgcgctggagg
gccgcgacgttctgggttcggcacctaccgggaccgggaaaaccgccgcatatttattac
cggtgttgcagcacctgctcgattttccgcgcaagaagtctggcccgccgcgtattttta
attttaacgccaacccgtgagctggccatgcaggttgccgaccaggcacgggaactggcg
aaacacacgcatctggatatcgccaccatcactggcggcgtggccttcatgaaccacgct
gaagtgtttagcgaaaatcaggatgtcgtggttgccaccactggtcgtctgctgcaatac
attaaagaagaaaactttgactgccgcgctgtagaaacgctgatcctggatgaagccgac
cgcatgctggacatgggctttgctcaggatattgaaaccatcgcgggcgaaacgcgctgg
cgcaaacagacgatgctgttttctgccacgctggaaggcgagcatatcaaggattttgcc
gagcgcctgctgaatgaaccggttgaactggaagccgatcccagccgtcgcgagcgtaag
aagatccagcagtggtatcaccgcgccgacgatcttgagcacaagacaaagctgctggtt
catctgttaaagcagccggaagtgacccgttcaattgtgtttgtgcgcaagcgtgaacgt
ctgcatgagctggtcagctggctgcatgatgccggtatccgcaccagctacctcgaaggt
gaaatggtgcaggctaagcgcaatgaggcgattaaacgcctggtcgaggggcgcgtcaat
gtgctggttgcgaccgatattgccgcacgtggtattgacgtcgacgatgtcagccacgtc
atcaacttcgatatgccgcgcaccgctgacacctatttgcaccgcattggccgtactggc
cgggccggtcgtaaaggtatcgcgatttcgctggttgaagcacacgaccatctgctgctc
ggtaaagtcagccgctacgttgatgaaccgattaaagcccgggtgattgacgagctgcgt
cctgttacgcgcgcgccttcggcgaaaacgacgggaaaaccgtcgaaaaaggcgcttgcc
aagcgtgcagagaaaaaagcgaaagaagaagagaaaccgcgggttaaaaagcgtcaccgt
gacctcaaaaacgtgggtaagcgtcgcaagccgagcggcagtacgccgggcagcgagagt
gcggaataa
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